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CD55 CD55 molecule (Cromer blood group) [ Pan paniscus (pygmy chimpanzee) ]

Gene ID: 100983678, updated on 6-Jun-2024

Summary

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Gene symbol
CD55
Gene description
CD55 molecule (Cromer blood group)
See related
Ensembl:ENSPPAG00000039018
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan paniscus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See CD55 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanPan1-v2.0_pri (GCF_029289425.2) 1 NC_073249.2 (42015372..42054589, complement)
RS_2023_05 previous assembly NHGRI_mPanPan1-v1.1-0.1.freeze_pri (GCF_029289425.1) 1 NC_073249.1 (41981330..42020548, complement)

Chromosome 1 - NC_073249.2Genomic Context describing neighboring genes Neighboring gene complement C3b/C4b receptor 1 (Knops blood group) Neighboring gene complement C3d receptor 2 Neighboring gene zona pellucida sperm-binding protein 3 receptor-like Neighboring gene C4b-binding protein alpha chain

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in T cell mediated immunity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of complement activation, classical pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
complement decay-accelerating factor

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029289425.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

Genomic

  1. NC_073249.2 Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

    Range
    42015372..42054589 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008976508.4 → XP_008974756.1  complement decay-accelerating factor isoform X12

    UniProtKB/TrEMBL
    A0A2R9BSB2
    Conserved Domains (3) summary
    cd00033
    Location:225 → 284
    CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
    smart00032
    Location:36 → 94
    CCP; Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR)
    pfam00084
    Location:98 → 158
    Sushi; Sushi repeat (SCR repeat)

  2. XM_008976507.4 → XP_008974755.1  complement decay-accelerating factor isoform X10

    UniProtKB/TrEMBL
    A0A2R9BSB2
    Related
    ENSPPAP00000032331.1
    Conserved Domains (3) summary
    cd00033
    Location:225 → 284
    CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
    smart00032
    Location:36 → 94
    CCP; Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR)
    pfam00084
    Location:98 → 158
    Sushi; Sushi repeat (SCR repeat)

  3. XM_063598756.1 → XP_063454826.1  complement decay-accelerating factor isoform X16

    UniProtKB/TrEMBL
    A0A2R9BSB9

  4. XM_003822896.7 → XP_003822944.1  complement decay-accelerating factor isoform X8

    UniProtKB/TrEMBL
    A0A2R9BRM3, A0A2R9BSB9
    Related
    ENSPPAP00000032328.1
    Conserved Domains (4) summary
    cd00033
    Location:225 → 284
    CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
    smart00032
    Location:36 → 94
    CCP; Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR)
    pfam00084
    Location:98 → 158
    Sushi; Sushi repeat (SCR repeat)
    pfam13900
    Location:365 → 400
    GVQW; Putative domain of unknown function

  5. XM_063598607.1 → XP_063454677.1  complement decay-accelerating factor isoform X6

  6. XM_008976505.6 → XP_008974753.1  complement decay-accelerating factor isoform X4

    UniProtKB/TrEMBL
    A0A2R9BSA1
    Related
    ENSPPAP00000032316.1
    Conserved Domains (3) summary
    cd00033
    Location:225 → 284
    CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
    smart00032
    Location:36 → 94
    CCP; Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR)
    pfam00084
    Location:98 → 158
    Sushi; Sushi repeat (SCR repeat)

  7. XM_055108675.2 → XP_054964650.1  complement decay-accelerating factor isoform X2

  8. XM_055108691.2 → XP_054964666.1  complement decay-accelerating factor isoform X15

  9. XM_055108681.2 → XP_054964656.1  complement decay-accelerating factor isoform X9

    UniProtKB/TrEMBL
    A0A2R9BSB9

  10. XM_063598723.1 → XP_063454793.1  complement decay-accelerating factor isoform X14

  11. XM_008976506.7 → XP_008974754.1  complement decay-accelerating factor isoform X7

    UniProtKB/TrEMBL
    A0A2R9BSB9, A0A2R9C0P9
    Related
    ENSPPAP00000032334.1
    Conserved Domains (4) summary
    cd00033
    Location:225 → 284
    CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
    smart00032
    Location:36 → 94
    CCP; Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR)
    pfam00084
    Location:98 → 158
    Sushi; Sushi repeat (SCR repeat)
    pfam13900
    Location:365 → 412
    GVQW; Putative domain of unknown function

  12. XM_063598672.1 → XP_063454742.1  complement decay-accelerating factor isoform X11

    UniProtKB/TrEMBL
    A0A2R9BSB9

  13. XM_063598572.1 → XP_063454642.1  complement decay-accelerating factor isoform X3

  14. XM_055108673.2 → XP_054964648.1  complement decay-accelerating factor isoform X1

  15. XM_063598588.1 → XP_063454658.1  complement decay-accelerating factor isoform X5

  16. XM_055108686.2 → XP_054964661.1  complement decay-accelerating factor isoform X13

RNA

  1. XR_010110524.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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