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GLT8D1 glycosyltransferase 8 domain containing 1 [ Pan paniscus (pygmy chimpanzee) ]

Gene ID: 100982994, updated on 3-Apr-2024

Summary

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Gene symbol
GLT8D1
Gene description
glycosyltransferase 8 domain containing 1
See related
Ensembl:ENSPPAG00000042721
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan paniscus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See GLT8D1 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanPan1-v2.0_pri (GCF_029289425.2) 2 NC_085926.1 (52688109..52699781, complement)
RS_2023_05 previous assembly NHGRI_mPanPan1-v1.1-0.1.freeze_pri (GCF_029289425.1) 3 NC_073252.1 (52692875..52704528, complement)

Chromosome 2 - NC_085926.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORD19 Neighboring gene small nucleolar RNA SNORD69 Neighboring gene G protein nucleolar 3 Neighboring gene signal peptidase complex subunit 1 Neighboring gene NIMA related kinase 4 Neighboring gene AKT-interacting protein-like Neighboring gene inter-alpha-trypsin inhibitor heavy chain 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycosyltransferase 8 domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029289425.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

Genomic

  1. NC_085926.1 Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

    Range
    52688109..52699781 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063602434.1 → XP_063458504.1  glycosyltransferase 8 domain-containing protein 1

    UniProtKB/TrEMBL
    A0A2R9CP51

  2. XM_008972119.5 → XP_008970367.1  glycosyltransferase 8 domain-containing protein 1

    See identical proteins and their annotated locations for XP_008970367.1

    UniProtKB/TrEMBL
    A0A2R9CP51
    Conserved Domains (1) summary
    cd06429
    Location:66 → 351
    GT8_like_1; GT8_like_1 represents a subfamily of GT8 with unknown function

  3. XM_003818755.6 → XP_003818803.1  glycosyltransferase 8 domain-containing protein 1

    See identical proteins and their annotated locations for XP_003818803.1

    UniProtKB/TrEMBL
    A0A2R9CP51
    Conserved Domains (1) summary
    cd06429
    Location:66 → 351
    GT8_like_1; GT8_like_1 represents a subfamily of GT8 with unknown function

  4. XM_008972116.5 → XP_008970364.1  glycosyltransferase 8 domain-containing protein 1

    See identical proteins and their annotated locations for XP_008970364.1

    UniProtKB/TrEMBL
    A0A2R9CP51
    Conserved Domains (1) summary
    cd06429
    Location:66 → 351
    GT8_like_1; GT8_like_1 represents a subfamily of GT8 with unknown function

  5. XM_008972115.5 → XP_008970363.1  glycosyltransferase 8 domain-containing protein 1

    See identical proteins and their annotated locations for XP_008970363.1

    UniProtKB/TrEMBL
    A0A2R9CP51
    Conserved Domains (1) summary
    cd06429
    Location:66 → 351
    GT8_like_1; GT8_like_1 represents a subfamily of GT8 with unknown function
Nucleotide Protein
Heading Accession and Version

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