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DERA deoxyribose-phosphate aldolase [ Pan paniscus (pygmy chimpanzee) ]

Gene ID: 100981648, updated on 8-Mar-2024

Summary

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Gene symbol
DERA
Gene description
deoxyribose-phosphate aldolase
See related
Ensembl:ENSPPAG00000026777
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan paniscus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See DERA in Genome Data Viewer
Location:
chromosome: 10
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanPan1-v2.0_pri (GCF_029289425.2) 10 NC_073259.2 (21358283..21483635)
RS_2023_05 previous assembly NHGRI_mPanPan1-v1.1-0.1.freeze_pri (GCF_029289425.1) 12 NC_073261.1 (21355045..21480408)

Chromosome 10 - NC_073259.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106635347 Neighboring gene serine/threonine kinase receptor associated protein Neighboring gene prolyl hydroxylase EGLN3-like Neighboring gene uncharacterized LOC117975386 Neighboring gene solute carrier family 15 member 5 Neighboring gene microsomal glutathione S-transferase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables deoxyribose-phosphate aldolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in deoxyribonucleotide catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
deoxyribose-phosphate aldolase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029289425.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

Genomic

  1. NC_073259.2 Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

    Range
    21358283..21483635
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003816530.6 → XP_003816578.1  deoxyribose-phosphate aldolase

    See identical proteins and their annotated locations for XP_003816578.1

    UniProtKB/TrEMBL
    A0A2R8ZRB1, A0A2R8ZUH6
    Related
    ENSPPAP00000007507.1
    Conserved Domains (1) summary
    cd00959
    Location:50 → 277
    DeoC; 2-deoxyribose-5-phosphate aldolase (DERA) of the DeoC family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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