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GALNT7 polypeptide N-acetylgalactosaminyltransferase 7 [ Pan paniscus (pygmy chimpanzee) ]

Gene ID: 100981343, updated on 10-Oct-2024

Summary

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Gene symbol
GALNT7
Gene description
polypeptide N-acetylgalactosaminyltransferase 7
See related
Ensembl:ENSPPAG00000034268
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan paniscus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See GALNT7 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanPan1-v2.0_pri (GCF_029289425.2) 3 NC_073252.2 (170929405..171084412)
RS_2023_05 previous assembly NHGRI_mPanPan1-v1.1-0.1.freeze_pri (GCF_029289425.1) 4 NC_073253.1 (171310459..171465365)

Chromosome 3 - NC_073252.2Genomic Context describing neighboring genes Neighboring gene polypeptide N-acetylgalactosaminyltransferase like 6 Neighboring gene AP-3 complex subunit sigma-1 Neighboring gene uncharacterized LOC130541473 Neighboring gene atherin-like Neighboring gene uncharacterized LOC112439619 Neighboring gene high mobility group box 2 Neighboring gene Sin3A associated protein 30

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polypeptide N-acetylgalactosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
N-acetylgalactosaminyltransferase 7
Names
UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029289425.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

Genomic

  1. NC_073252.2 Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

    Range
    170929405..171084412
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003823418.7 → XP_003823466.3  N-acetylgalactosaminyltransferase 7 isoform X1

    UniProtKB/TrEMBL
    A0A2R9B408

  2. XM_008977069.5 → XP_008975317.1  N-acetylgalactosaminyltransferase 7 isoform X2

    UniProtKB/TrEMBL
    A0A2R9B412
    Conserved Domains (4) summary
    cd02510
    Location:210 → 518
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    COG1215
    Location:210 → 438
    BcsA; Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase [Cell motility]
    cd00161
    Location:535 → 651
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
    pfam00652
    Location:534 → 649
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  3. XM_063603995.1 → XP_063460065.1  N-acetylgalactosaminyltransferase 7 isoform X5

  4. XM_063603994.1 → XP_063460064.1  N-acetylgalactosaminyltransferase 7 isoform X4

  5. XM_063603993.1 → XP_063460063.1  N-acetylgalactosaminyltransferase 7 isoform X3

Nucleotide Protein
Heading Accession and Version

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