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GPC3 glypican 3 [ Pan paniscus (pygmy chimpanzee) ]

Gene ID: 100981056, updated on 8-Mar-2024

Summary

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Gene symbol
GPC3
Gene description
glypican 3
See related
Ensembl:ENSPPAG00000014932
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan paniscus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See GPC3 in Genome Data Viewer
Location:
chromosome: X
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanPan1-v2.0_pri (GCF_029289425.2) X NC_073272.2 (132962618..133417727, complement)
RS_2023_05 previous assembly NHGRI_mPanPan1-v1.1-0.1.freeze_pri (GCF_029289425.1) X NC_073272.1 (132966213..133421264, complement)

Chromosome X - NC_073272.2Genomic Context describing neighboring genes Neighboring gene glypican 4 Neighboring gene U6 spliceosomal RNA Neighboring gene small ribosomal subunit protein eS24-like Neighboring gene small ribosomal subunit protein uS2-like Neighboring gene microRNA mir-92a-2 Neighboring gene microRNA mir-19b-2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of canonical Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of protein localization to membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in collagen-containing extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glypican-3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029289425.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

Genomic

  1. NC_073272.2 Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

    Range
    132962618..133417727 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003814501.5 → XP_003814549.1  glypican-3

    See identical proteins and their annotated locations for XP_003814549.1

    UniProtKB/TrEMBL
    A0A2R8ZID5, A0A2R8ZLE9
    Related
    ENSPPAP00000003570.1
    Conserved Domains (1) summary
    pfam01153
    Location:14 → 577
    Glypican; Glypican
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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