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CERS5 ceramide synthase 5 [ Pan paniscus (pygmy chimpanzee) ]

Gene ID: 100980816, updated on 8-Mar-2024

Summary

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Gene symbol
CERS5
Gene description
ceramide synthase 5
See related
Ensembl:ENSPPAG00000035094
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan paniscus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See CERS5 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanPan1-v2.0_pri (GCF_029289425.2) 10 NC_073259.2 (44021643..44059591)
RS_2023_05 previous assembly NHGRI_mPanPan1-v1.1-0.1.freeze_pri (GCF_029289425.1) 12 NC_073261.1 (44017015..44056354)

Chromosome 10 - NC_073259.2Genomic Context describing neighboring genes Neighboring gene family with sequence similarity 186 member A Neighboring gene large ribosomal subunit protein uL24-like Neighboring gene U6 spliceosomal RNA Neighboring gene LIM domain and actin binding 1 Neighboring gene cytochrome c oxidase assembly protein COX14 Neighboring gene glycerol-3-phosphate dehydrogenase 1 Neighboring gene SWI/SNF related BAF chromatin remodeling complex subunit D1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sphingosine N-acyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ceramide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ceramide synthase 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029289425.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

Genomic

  1. NC_073259.2 Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

    Range
    44021643..44059591
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_055095674.2 → XP_054951649.1  ceramide synthase 5 isoform X13

  2. XM_055095669.2 → XP_054951644.1  ceramide synthase 5 isoform X4

  3. XM_055095668.2 → XP_054951643.1  ceramide synthase 5 isoform X1

  4. XM_034935898.3 → XP_034791789.1  ceramide synthase 5 isoform X10

    UniProtKB/TrEMBL
    A0A2R9B2W0
    Conserved Domains (2) summary
    cd00086
    Location:88 → 135
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
    pfam03798
    Location:139 → 322
    TRAM_LAG1_CLN8; TLC domain

  5. XM_055095670.2 → XP_054951645.1  ceramide synthase 5 isoform X5

  6. XM_008951210.4 → XP_008949458.3  ceramide synthase 5 isoform X3

  7. XM_008951214.5 → XP_008949462.1  ceramide synthase 5 isoform X8

    Conserved Domains (2) summary
    cd00086
    Location:88 → 135
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
    pfam03798
    Location:139 → 332
    TRAM_LAG1_CLN8; TLC domain

  8. XM_008951209.4 → XP_008949457.3  ceramide synthase 5 isoform X2

  9. XM_003825859.5 → XP_003825907.1  ceramide synthase 5 isoform X7

    UniProtKB/TrEMBL
    A0A2R9B4F4
    Related
    ENSPPAP00000023891.1
    Conserved Domains (2) summary
    cd00086
    Location:88 → 135
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
    pfam03798
    Location:139 → 332
    TRAM_LAG1_CLN8; TLC domain

  10. XM_034935899.3 → XP_034791790.1  ceramide synthase 5 isoform X11

    UniProtKB/TrEMBL
    A0A2R9B2W4
    Conserved Domains (2) summary
    cd00086
    Location:31 → 78
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
    pfam03798
    Location:82 → 275
    TRAM_LAG1_CLN8; TLC domain

  11. XM_055095671.2 → XP_054951646.1  ceramide synthase 5 isoform X6

  12. XM_055095673.2 → XP_054951648.1  ceramide synthase 5 isoform X9

  13. XM_055095672.2 → XP_054951647.1  ceramide synthase 5 isoform X6

  14. XM_063593513.1 → XP_063449583.1  ceramide synthase 5 isoform X12

Nucleotide Protein
Heading Accession and Version

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