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CANX calnexin [ Pan paniscus (pygmy chimpanzee) ]

Gene ID: 100980239, updated on 8-Mar-2024

Summary

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Gene symbol
CANX
Gene description
calnexin
See related
Ensembl:ENSPPAG00000034073
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan paniscus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See CANX in Genome Data Viewer
Location:
chromosome: 4
Exon count:
22
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanPan1-v2.0_pri (GCF_029289425.2) 4 NC_073253.2 (174621670..174673516)
RS_2023_05 previous assembly NHGRI_mPanPan1-v1.1-0.1.freeze_pri (GCF_029289425.1) 5 NC_073254.1 (172761209..172813055)

Chromosome 4 - NC_073253.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134730385 Neighboring gene uncharacterized protein C5orf60 Neighboring gene high mobility group protein B3-like Neighboring gene chibby family member 3 Neighboring gene mastermind like transcriptional coactivator 1 Neighboring gene uncharacterized LOC112439826 Neighboring gene leukotriene C4 synthase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables unfolded protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein folding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
calnexin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029289425.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

Genomic

  1. NC_073253.2 Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

    Range
    174621670..174673516
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034961197.2 → XP_034817088.1  calnexin isoform X3

    UniProtKB/TrEMBL
    A0A2R9AWV7
    Conserved Domains (1) summary
    pfam00262
    Location:71 → 440
    Calreticulin; Calreticulin family

  2. XM_055112906.1 → XP_054968881.1  calnexin isoform X1

  3. XM_055112909.1 → XP_054968884.1  calnexin isoform X1

  4. XM_055112908.1 → XP_054968883.1  calnexin isoform X5

  5. XM_063604341.1 → XP_063460411.1  calnexin isoform X1

  6. XM_063604340.1 → XP_063460410.1  calnexin isoform X2

  7. XM_008961400.5 → XP_008959648.1  calnexin isoform X4

    Conserved Domains (1) summary
    pfam00262
    Location:125 → 494
    Calreticulin; Calreticulin family

  8. XM_003809204.4 → XP_003809252.1  calnexin isoform X3

    See identical proteins and their annotated locations for XP_003809252.1

    UniProtKB/TrEMBL
    A0A2R9AWV7
    Conserved Domains (1) summary
    pfam00262
    Location:71 → 440
    Calreticulin; Calreticulin family

  9. XM_003809203.5 → XP_003809251.1  calnexin isoform X3

    See identical proteins and their annotated locations for XP_003809251.1

    UniProtKB/TrEMBL
    A0A2R9AWV7
    Related
    ENSPPAP00000021763.1
    Conserved Domains (1) summary
    pfam00262
    Location:71 → 440
    Calreticulin; Calreticulin family

  10. XM_055112907.1 → XP_054968882.1  calnexin isoform X4

Nucleotide Protein
Heading Accession and Version

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