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UGP2 UDP-glucose pyrophosphorylase 2 [ Pan paniscus (pygmy chimpanzee) ]

Gene ID: 100980155, updated on 8-Mar-2024

Summary

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Gene symbol
UGP2
Gene description
UDP-glucose pyrophosphorylase 2
See related
Ensembl:ENSPPAG00000038898
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan paniscus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See UGP2 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanPan1-v2.0_pri (GCF_029289425.2) 12 NC_073261.2 (62507777..62560210, complement)
RS_2023_05 previous assembly NHGRI_mPanPan1-v1.1-0.1.freeze_pri (GCF_029289425.1) 2A NC_073250.1 (62511728..62564161, complement)

Chromosome 12 - NC_073261.2Genomic Context describing neighboring genes Neighboring gene pellino E3 ubiquitin protein ligase 1 Neighboring gene VPS54 subunit of GARP complex Neighboring gene small ribosomal subunit protein eS4-like Neighboring gene heterogeneous nuclear ribonucleoprotein A1-like Neighboring gene WD repeat containing planar cell polarity effector Neighboring gene large ribosomal subunit protein eL27-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UTP:glucose-1-phosphate uridylyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in UDP-glucose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycogen metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UTP--glucose-1-phosphate uridylyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029289425.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

Genomic

  1. NC_073261.2 Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

    Range
    62507777..62560210 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034953260.2 → XP_034809151.1  UTP--glucose-1-phosphate uridylyltransferase isoform X2

    UniProtKB/TrEMBL
    A0A2R9BQU5, A0A2R9BUC1
    Conserved Domains (1) summary
    pfam01704
    Location:44 → 462
    UDPGP; UTP--glucose-1-phosphate uridylyltransferase

  2. XM_003830893.7 → XP_003830941.2  UTP--glucose-1-phosphate uridylyltransferase isoform X1

    UniProtKB/TrEMBL
    A0A2R9BQU5
    Conserved Domains (1) summary
    pfam01704
    Location:55 → 473
    UDPGP; UTP--glucose-1-phosphate uridylyltransferase
Nucleotide Protein
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Gene LinkOut

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