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HS3ST5 heparan sulfate-glucosamine 3-sulfotransferase 5 [ Pan paniscus (pygmy chimpanzee) ]

Gene ID: 100979280, updated on 3-Apr-2024

Summary

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Gene symbol
HS3ST5
Gene description
heparan sulfate-glucosamine 3-sulfotransferase 5
See related
Ensembl:ENSPPAG00000026905
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan paniscus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See HS3ST5 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanPan1-v2.0_pri (GCF_029289425.2) 5 NC_073254.2 (134051720..134338936, complement)
RS_2023_05 previous assembly NHGRI_mPanPan1-v1.1-0.1.freeze_pri (GCF_029289425.1) 6 NC_073255.1 (131947187..132233730, complement)

Chromosome 5 - NC_073254.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC130541611 Neighboring gene histone deacetylase 2 Neighboring gene dnaJ homolog subfamily A member 1-like Neighboring gene glycine cleavage system H protein, mitochondrial

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heparan sulfate glucosamine 3-O-sulfotransferase 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029289425.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

Genomic

  1. NC_073254.2 Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

    Range
    134051720..134338936 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063605429.1 → XP_063461499.1  heparan sulfate glucosamine 3-O-sulfotransferase 5

    UniProtKB/TrEMBL
    A0A2R8ZRJ5

  2. XM_034962730.3 → XP_034818621.1  heparan sulfate glucosamine 3-O-sulfotransferase 5

    UniProtKB/TrEMBL
    A0A2R8ZRJ5
    Conserved Domains (1) summary
    pfam00685
    Location:90 → 330
    Sulfotransfer_1; Sulfotransferase domain

  3. XM_055114072.2 → XP_054970047.1  heparan sulfate glucosamine 3-O-sulfotransferase 5

    UniProtKB/TrEMBL
    A0A2R8ZRJ5

  4. XM_063605428.1 → XP_063461498.1  heparan sulfate glucosamine 3-O-sulfotransferase 5

    UniProtKB/TrEMBL
    A0A2R8ZRJ5

  5. XM_034962728.3 → XP_034818619.1  heparan sulfate glucosamine 3-O-sulfotransferase 5

    UniProtKB/TrEMBL
    A0A2R8ZRJ5
    Conserved Domains (1) summary
    pfam00685
    Location:90 → 330
    Sulfotransfer_1; Sulfotransferase domain

  6. XM_055114071.2 → XP_054970046.1  heparan sulfate glucosamine 3-O-sulfotransferase 5

    UniProtKB/TrEMBL
    A0A2R8ZRJ5

  7. XM_034962729.3 → XP_034818620.1  heparan sulfate glucosamine 3-O-sulfotransferase 5

    UniProtKB/TrEMBL
    A0A2R8ZRJ5
    Conserved Domains (1) summary
    pfam00685
    Location:90 → 330
    Sulfotransfer_1; Sulfotransferase domain

  8. XM_055114070.2 → XP_054970045.1  heparan sulfate glucosamine 3-O-sulfotransferase 5

    UniProtKB/TrEMBL
    A0A2R8ZRJ5

  9. XM_057302581.2 → XP_057158564.1  heparan sulfate glucosamine 3-O-sulfotransferase 5

    UniProtKB/TrEMBL
    A0A2R8ZRJ5

  10. XM_014345452.5 → XP_014200938.1  heparan sulfate glucosamine 3-O-sulfotransferase 5

    UniProtKB/TrEMBL
    A0A2R8ZRJ5
    Related
    ENSPPAP00000007592.1
    Conserved Domains (1) summary
    pfam00685
    Location:90 → 330
    Sulfotransfer_1; Sulfotransferase domain

  11. XM_034962731.3 → XP_034818622.1  heparan sulfate glucosamine 3-O-sulfotransferase 5

    UniProtKB/TrEMBL
    A0A2R8ZRJ5
    Conserved Domains (1) summary
    pfam00685
    Location:90 → 330
    Sulfotransfer_1; Sulfotransferase domain
Nucleotide Protein
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