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HS6ST2 heparan sulfate 6-O-sulfotransferase 2 [ Pan paniscus (pygmy chimpanzee) ]

Gene ID: 100978573, updated on 8-Mar-2024

Summary

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Gene symbol
HS6ST2
Gene description
heparan sulfate 6-O-sulfotransferase 2
See related
Ensembl:ENSPPAG00000032007
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan paniscus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See HS6ST2 in Genome Data Viewer
Location:
chromosome: X
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanPan1-v2.0_pri (GCF_029289425.2) X NC_073272.2 (132050917..132368649, complement)
RS_2023_05 previous assembly NHGRI_mPanPan1-v1.1-0.1.freeze_pri (GCF_029289425.1) X NC_073272.1 (132054511..132372243, complement)

Chromosome X - NC_073272.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC129395456 Neighboring gene muscleblind like splicing regulator 3 Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC130541179 Neighboring gene thioredoxin-dependent peroxide reductase, mitochondrial-like Neighboring gene uncharacterized LOC117977719 Neighboring gene ubiquitin specific peptidase 26 Neighboring gene small nucleolar RNA SNORA8

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heparan sulfate 6-O-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in heparan sulfate proteoglycan biosynthetic process, enzymatic modification IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heparan-sulfate 6-O-sulfotransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029289425.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

Genomic

  1. NC_073272.2 Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

    Range
    132050917..132368649 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008967173.5 → XP_008965421.1  heparan-sulfate 6-O-sulfotransferase 2 isoform X3

    UniProtKB/TrEMBL
    A0A2R9AKB0
    Related
    ENSPPAP00000017807.1
    Conserved Domains (1) summary
    pfam03567
    Location:225 → 490
    Sulfotransfer_2; Sulfotransferase family

  2. XM_008967170.4 → XP_008965418.1  heparan-sulfate 6-O-sulfotransferase 2 isoform X1

    UniProtKB/TrEMBL
    A0A2R9AL13
    Related
    ENSPPAP00000017803.1
    Conserved Domains (1) summary
    pfam03567
    Location:225 → 530
    Sulfotransfer_2; Sulfotransferase family

  3. XM_008967171.4 → XP_008965419.1  heparan-sulfate 6-O-sulfotransferase 2 isoform X2

    Conserved Domains (1) summary
    pfam03567
    Location:225 → 519
    Sulfotransfer_2; Sulfotransferase family
Nucleotide Protein
Heading Accession and Version

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