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SLC39A8 solute carrier family 39 member 8 [ Pan paniscus (pygmy chimpanzee) ]

Gene ID: 100978566, updated on 8-Mar-2024

Summary

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Gene symbol
SLC39A8
Gene description
solute carrier family 39 member 8
See related
Ensembl:ENSPPAG00000036056
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan paniscus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See SLC39A8 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanPan1-v2.0_pri (GCF_029289425.2) 3 NC_073252.2 (100339570..100430481, complement)
RS_2023_05 previous assembly NHGRI_mPanPan1-v1.1-0.1.freeze_pri (GCF_029289425.1) 4 NC_073253.1 (100626388..100716146, complement)

Chromosome 3 - NC_073252.2Genomic Context describing neighboring genes Neighboring gene B cell scaffold protein with ankyrin repeats 1 Neighboring gene zinc finger protein 532-like Neighboring gene zinc finger protein 705A-like Neighboring gene nuclear factor kappa B subunit 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables monoatomic cation:bicarbonate symporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular monoatomic cation homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in zinc ion import across plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
metal cation symporter ZIP8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029289425.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

Genomic

  1. NC_073252.2 Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

    Range
    100339570..100430481 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_055111664.2 → XP_054967639.1  metal cation symporter ZIP8 isoform X2

  2. XM_055111663.3 → XP_054967638.1  metal cation symporter ZIP8 isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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