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ST3GAL6 ST3 beta-galactoside alpha-2,3-sialyltransferase 6 [ Pan paniscus (pygmy chimpanzee) ]

Gene ID: 100977718, updated on 8-Mar-2024

Summary

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Gene symbol
ST3GAL6
Gene description
ST3 beta-galactoside alpha-2,3-sialyltransferase 6
See related
Ensembl:ENSPPAG00000001221
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan paniscus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See ST3GAL6 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanPan1-v2.0_pri (GCF_029289425.2) 2 NC_085926.1 (96682241..96748939)
RS_2023_05 previous assembly NHGRI_mPanPan1-v1.1-0.1.freeze_pri (GCF_029289425.1) 3 NC_073252.1 (96687012..96754585)

Chromosome 2 - NC_085926.1Genomic Context describing neighboring genes Neighboring gene coproporphyrinogen oxidase Neighboring gene NEDD4-like E3 ubiquitin-protein ligase WWP1 Neighboring gene uncharacterized LOC112439273 Neighboring gene uncharacterized LOC129397419 Neighboring gene U6 spliceosomal RNA Neighboring gene discoidin, CUB and LCCL domain containing 2 Neighboring gene small nucleolar RNA U3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-galactoside alpha-2,3-sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
type 2 lactosamine alpha-2,3-sialyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029289425.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

Genomic

  1. NC_085926.1 Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

    Range
    96682241..96748939
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014344315.5 → XP_014199801.2  type 2 lactosamine alpha-2,3-sialyltransferase isoform X4

  2. XM_014344312.4 → XP_014199798.2  type 2 lactosamine alpha-2,3-sialyltransferase isoform X4

  3. XM_003821902.5 → XP_003821950.2  type 2 lactosamine alpha-2,3-sialyltransferase isoform X4

  4. XM_008975385.6 → XP_008973633.3  type 2 lactosamine alpha-2,3-sialyltransferase isoform X1

  5. XM_003821904.8 → XP_003821952.3  type 2 lactosamine alpha-2,3-sialyltransferase isoform X2

  6. XM_034957001.3 → XP_034812892.2  type 2 lactosamine alpha-2,3-sialyltransferase isoform X4

  7. XM_014344314.5 → XP_014199800.2  type 2 lactosamine alpha-2,3-sialyltransferase isoform X4

  8. XM_034957003.3 → XP_034812894.2  type 2 lactosamine alpha-2,3-sialyltransferase isoform X4

  9. XM_008975382.6 → XP_008973630.2  type 2 lactosamine alpha-2,3-sialyltransferase isoform X4

  10. XM_008975379.6 → XP_008973627.2  type 2 lactosamine alpha-2,3-sialyltransferase isoform X3

  11. XM_055110198.2 → XP_054966173.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X5

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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