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DDB1 damage specific DNA binding protein 1 [ Pan paniscus (pygmy chimpanzee) ]

Gene ID: 100974073, updated on 8-Mar-2024

Summary

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Gene symbol
DDB1
Gene description
damage specific DNA binding protein 1
See related
Ensembl:ENSPPAG00000035343
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan paniscus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See DDB1 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
28
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanPan1-v2.0_pri (GCF_029289425.2) 9 NC_073258.2 (62467451..62501152, complement)
RS_2023_05 previous assembly NHGRI_mPanPan1-v1.1-0.1.freeze_pri (GCF_029289425.1) 11 NC_073260.1 (63511126..63544583, complement)

Chromosome 9 - NC_073258.2Genomic Context describing neighboring genes Neighboring gene pepsinogen A5 Neighboring gene von Willebrand factor C and EGF domains Neighboring gene lysosomal membrane ascorbate-dependent ferrireductase CYB561A3 Neighboring gene triokinase and FMN cyclase Neighboring gene transmembrane protein 138 Neighboring gene transmembrane protein 216

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in site of double-strand break IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA damage-binding protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029289425.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

Genomic

  1. NC_073258.2 Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

    Range
    62467451..62501152 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034932715.3 → XP_034788606.2  DNA damage-binding protein 1

Nucleotide Protein
Heading Accession and Version

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