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CERS4 ceramide synthase 4 [ Pan paniscus (pygmy chimpanzee) ]

Gene ID: 100973710, updated on 8-Mar-2024

Summary

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Gene symbol
CERS4
Gene description
ceramide synthase 4
See related
Ensembl:ENSPPAG00000041286
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan paniscus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See CERS4 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanPan1-v2.0_pri (GCF_029289425.2) 20 NC_073269.2 (12890575..12944580)
RS_2023_05 previous assembly NHGRI_mPanPan1-v1.1-0.1.freeze_pri (GCF_029289425.1) 19 NC_073268.1 (12007769..12065077)

Chromosome 20 - NC_073269.2Genomic Context describing neighboring genes Neighboring gene C-C motif chemokine ligand 25 Neighboring gene fibrillin 3 Neighboring gene CD320 molecule Neighboring gene NADH:ubiquinone oxidoreductase subunit A7 Neighboring gene ribosomal protein S28

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sphingosine N-acyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ceramide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ceramide synthase 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029289425.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

Genomic

  1. NC_073269.2 Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

    Range
    12890575..12944580
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034946886.3 → XP_034802777.1  ceramide synthase 4 isoform X2

    Conserved Domains (2) summary
    smart00724
    Location:129 → 330
    TLC; TRAM, LAG1 and CLN8 homology domains
    cd00086
    Location:71 → 126
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.

  2. XM_034946887.3 → XP_034802778.1  ceramide synthase 4 isoform X3

    Conserved Domains (2) summary
    smart00724
    Location:131 → 289
    TLC; TRAM, LAG1 and CLN8 homology domains
    cd00086
    Location:71 → 128
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.

  3. XM_034946885.3 → XP_034802776.1  ceramide synthase 4 isoform X1

    UniProtKB/TrEMBL
    A0A2R9CFQ2
    Conserved Domains (2) summary
    smart00724
    Location:131 → 332
    TLC; TRAM, LAG1 and CLN8 homology domains
    cd00086
    Location:71 → 128
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.

  4. XM_034946891.3 → XP_034802782.1  ceramide synthase 4 isoform X1

    UniProtKB/TrEMBL
    A0A2R9CFQ2
    Conserved Domains (2) summary
    smart00724
    Location:131 → 332
    TLC; TRAM, LAG1 and CLN8 homology domains
    cd00086
    Location:71 → 128
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.

  5. XM_034946888.3 → XP_034802779.1  ceramide synthase 4 isoform X1

    UniProtKB/TrEMBL
    A0A2R9CFQ2
    Conserved Domains (2) summary
    smart00724
    Location:131 → 332
    TLC; TRAM, LAG1 and CLN8 homology domains
    cd00086
    Location:71 → 128
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.

  6. XM_055102813.2 → XP_054958788.1  ceramide synthase 4 isoform X1

    UniProtKB/TrEMBL
    A0A2R9CFQ2

  7. XM_055102815.2 → XP_054958790.1  ceramide synthase 4 isoform X4

  8. XM_055102812.2 → XP_054958787.1  ceramide synthase 4 isoform X1

    UniProtKB/TrEMBL
    A0A2R9CFQ2

  9. XM_055102811.2 → XP_054958786.1  ceramide synthase 4 isoform X1

    UniProtKB/TrEMBL
    A0A2R9CFQ2

  10. XM_034946890.3 → XP_034802781.1  ceramide synthase 4 isoform X1

    UniProtKB/TrEMBL
    A0A2R9CFQ2
    Conserved Domains (2) summary
    smart00724
    Location:131 → 332
    TLC; TRAM, LAG1 and CLN8 homology domains
    cd00086
    Location:71 → 128
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.

  11. XM_055102814.2 → XP_054958789.1  ceramide synthase 4 isoform X4

Nucleotide Protein
Heading Accession and Version

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