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ALDH5A1 aldehyde dehydrogenase 5 family member A1 [ Pan paniscus (pygmy chimpanzee) ]

Gene ID: 100973567, updated on 6-Jun-2024

Summary

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Gene symbol
ALDH5A1
Gene description
aldehyde dehydrogenase 5 family member A1
See related
Ensembl:ENSPPAG00000035655
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pan paniscus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See ALDH5A1 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanPan1-v2.0_pri (GCF_029289425.2) 5 NC_073254.2 (39145143..39187630)
RS_2023_05 previous assembly NHGRI_mPanPan1-v1.1-0.1.freeze_pri (GCF_029289425.1) 6 NC_073255.1 (35144631..35187096)

Chromosome 5 - NC_073254.2Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene magnesium transporter MRS2 Neighboring gene glycosylphosphatidylinositol specific phospholipase D1 Neighboring gene KIAA0319 ortholog Neighboring gene keratin, type II cytoskeletal 8-like Neighboring gene tyrosyl-DNA phosphodiesterase 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. SSADH variation in primates: intra- and interspecific data on a gene with a potential role in human cognitive functions. Blasi P, et al. J Mol Evol, 2006 Jul. PMID 16786440

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables succinate-semialdehyde dehydrogenase (NAD+) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in gamma-aminobutyric acid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
succinate-semialdehyde dehydrogenase, mitochondrial
Names
Aldehyde dehydrogenase family 5 member A1
NAD(+)-dependent succinic semialdehyde dehydrogenase
succinic semialdehyde dehydrogenase
NP_001266175.1
XP_054969093.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001279246.1 → NP_001266175.1  succinate-semialdehyde dehydrogenase, mitochondrial

    See identical proteins and their annotated locations for NP_001266175.1

    Status: PROVISIONAL

    Source sequence(s)
    AJ891037
    UniProtKB/Swiss-Prot
    Q3MSM4
    UniProtKB/TrEMBL
    A0A2R9B656
    Related
    ENSPPAP00000025068.1, ENSPPAT00000047894.1
    Conserved Domains (1) summary
    TIGR01780
    Location:78 → 528
    SSADH; succinate-semialdehyde dehydrogenase

RefSeqs of Annotated Genomes: GCF_029289425.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

Genomic

  1. NC_073254.2 Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

    Range
    39145143..39187630
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_055113118.2 → XP_054969093.1  succinate-semialdehyde dehydrogenase, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A2R9B652
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q3MSM4.1 GenPept UniProtKB/Swiss-Prot:Q3MSM4

Gene LinkOut

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