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KPTN kaptin, actin binding protein [ Pan paniscus (pygmy chimpanzee) ]

Gene ID: 100973148, updated on 8-Mar-2024

Summary

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Gene symbol
KPTN
Gene description
kaptin, actin binding protein
See related
Ensembl:ENSPPAG00000008738
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan paniscus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See KPTN in Genome Data Viewer
Location:
chromosome: 20
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanPan1-v2.0_pri (GCF_029289425.2) 20 NC_073269.2 (53626381..53637200, complement)
RS_2023_05 previous assembly NHGRI_mPanPan1-v1.1-0.1.freeze_pri (GCF_029289425.1) 19 NC_073268.1 (55496371..55505520, complement)

Chromosome 20 - NC_073269.2Genomic Context describing neighboring genes Neighboring gene Meis homeobox 3 Neighboring gene solute carrier family 8 member A2 Neighboring gene NSF attachment protein alpha Neighboring gene zinc finger protein 541

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin filament organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cellular response to amino acid starvation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of TORC1 signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of KICSTOR complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in actin cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lamellipodium IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
KICSTOR complex protein kaptin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029289425.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

Genomic

  1. NC_073269.2 Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

    Range
    53626381..53637200 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063600441.1 → XP_063456511.1  KICSTOR complex protein kaptin isoform X1

  2. XM_063600442.1 → XP_063456512.1  KICSTOR complex protein kaptin isoform X2

  3. XM_003814108.4 → XP_003814156.1  KICSTOR complex protein kaptin isoform X3

    UniProtKB/TrEMBL
    A0A2R8ZA84
    Related
    ENSPPAP00000001935.1
    Conserved Domains (1) summary
    pfam13517
    Location:317 → 384
    VCBS; Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella

  4. XM_034944830.3 → XP_034800721.1  KICSTOR complex protein kaptin isoform X4

    Conserved Domains (1) summary
    pfam13517
    Location:261 → 328
    VCBS; Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella
Nucleotide Protein
Heading Accession and Version

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