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XPO6 exportin 6 [ Pan paniscus (pygmy chimpanzee) ]

Gene ID: 100972760, updated on 10-Oct-2024

Summary

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Gene symbol
XPO6
Gene description
exportin 6
See related
Ensembl:ENSPPAG00000033668
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan paniscus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See XPO6 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
24
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanPan1-v2.0_pri (GCF_029289425.2) 18 NC_073267.2 (29495054..29609022, complement)
RS_2023_05 previous assembly NHGRI_mPanPan1-v1.1-0.1.freeze_pri (GCF_029289425.1) 16 NC_073265.1 (34031603..34145576, complement)

Chromosome 18 - NC_073267.2Genomic Context describing neighboring genes Neighboring gene GSG1 like Neighboring gene U6 spliceosomal RNA Neighboring gene U6 spliceosomal RNA Neighboring gene small nucleolar RNA SNORA25 Neighboring gene glyceraldehyde-3-phosphate dehydrogenase-like Neighboring gene SH3 domain binding kinase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nuclear export signal receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables small GTPase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein export from nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
exportin-6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029289425.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

Genomic

  1. NC_073267.2 Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

    Range
    29495054..29609022 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003807768.6 → XP_003807816.1  exportin-6 isoform X3

    See identical proteins and their annotated locations for XP_003807816.1

    UniProtKB/TrEMBL
    A0A2R9AZ27, A0A2R9AZ37
    Related
    ENSPPAP00000021100.1
    Conserved Domains (2) summary
    smart00913
    Location:31 → 96
    IBN_N; Importin-beta N-terminal domain
    pfam08389
    Location:103 → 277
    Xpo1; Exportin 1-like protein

  2. XM_008959908.4 → XP_008958156.1  exportin-6 isoform X4

    UniProtKB/TrEMBL
    A0A2R9AZ37
    Conserved Domains (2) summary
    smart00913
    Location:31 → 96
    IBN_N; Importin-beta N-terminal domain
    pfam08389
    Location:103 → 253
    Xpo1; Exportin 1-like protein

  3. XM_063597959.1 → XP_063454029.1  exportin-6 isoform X2

  4. XM_063597958.1 → XP_063454028.1  exportin-6 isoform X1

  5. XM_063597960.1 → XP_063454030.1  exportin-6 isoform X5

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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