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GALNT13 polypeptide N-acetylgalactosaminyltransferase 13 [ Pan paniscus (pygmy chimpanzee) ]

Gene ID: 100972708, updated on 10-Oct-2024

Summary

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Gene symbol
GALNT13
Gene description
polypeptide N-acetylgalactosaminyltransferase 13
See related
Ensembl:ENSPPAG00000035152
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan paniscus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See GALNT13 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanPan1-v2.0_pri (GCF_029289425.2) 13 NC_073262.2 (56013558..57122029)
RS_2023_05 previous assembly NHGRI_mPanPan1-v1.1-0.1.freeze_pri (GCF_029289425.1) 2B NC_073251.1 (56420858..57137008)

Chromosome 13 - NC_073262.2Genomic Context describing neighboring genes Neighboring gene ARF like GTPase 6 interacting protein 6 Neighboring gene ATP synthase F(0) complex subunit B1, mitochondrial-like Neighboring gene tubulin alpha-1B chain-like Neighboring gene small nucleolar RNA SNORD56 Neighboring gene reprimo, TP53 dependent G2 arrest mediator homolog Neighboring gene dnaJ homolog subfamily A member 1-like Neighboring gene prohibitin 1-like Neighboring gene chromobox protein homolog 3-like Neighboring gene potassium inwardly rectifying channel subfamily J member 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polypeptide N-acetylgalactosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase 13
Names
UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13 (GalNAc-T13)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029289425.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

Genomic

  1. NC_073262.2 Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

    Range
    56013558..57122029
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063595199.1 → XP_063451269.1  polypeptide N-acetylgalactosaminyltransferase 13 isoform X2

    UniProtKB/TrEMBL
    A0A2R9B4U5

  2. XM_055108593.2 → XP_054964568.1  polypeptide N-acetylgalactosaminyltransferase 13 isoform X1

  3. XM_055108595.2 → XP_054964570.1  polypeptide N-acetylgalactosaminyltransferase 13 isoform X3

  4. XM_055108596.2 → XP_054964571.1  polypeptide N-acetylgalactosaminyltransferase 13 isoform X4

    UniProtKB/TrEMBL
    A0A2R9B363

  5. XM_055108591.2 → XP_054964566.1  polypeptide N-acetylgalactosaminyltransferase 13 isoform X1

  6. XM_055108592.2 → XP_054964567.1  polypeptide N-acetylgalactosaminyltransferase 13 isoform X1

  7. XM_055108594.2 → XP_054964569.1  polypeptide N-acetylgalactosaminyltransferase 13 isoform X2

    UniProtKB/TrEMBL
    A0A2R9B4U5

  8. XM_057301416.2 → XP_057157399.1  polypeptide N-acetylgalactosaminyltransferase 13 isoform X2

    UniProtKB/TrEMBL
    A0A2R9B4U5
Nucleotide Protein
Heading Accession and Version

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