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SLC35A3 solute carrier family 35 member A3 [ Pan paniscus (pygmy chimpanzee) ]

Gene ID: 100971182, updated on 10-Oct-2024

Summary

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Gene symbol
SLC35A3
Gene description
solute carrier family 35 member A3
See related
Ensembl:ENSPPAG00000040427
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan paniscus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See SLC35A3 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanPan1-v2.0_pri (GCF_029289425.2) 1 NC_073249.2 (126987780..127064633, complement)
RS_2023_05 previous assembly NHGRI_mPanPan1-v1.1-0.1.freeze_pri (GCF_029289425.1) 1 NC_073249.1 (126157471..126215367, complement)

Chromosome 1 - NC_073249.2Genomic Context describing neighboring genes Neighboring gene leucine rich repeat containing 39 Neighboring gene tRNA methyltransferase 13 homolog Neighboring gene SAS-6 centriolar assembly protein Neighboring gene major facilitator superfamily domain containing 14A Neighboring gene U6 spliceosomal RNA Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC106635067 Neighboring gene amylo-alpha-1,6-glucosidase and 4-alpha-glucanotransferase Neighboring gene uncharacterized LOC134729596 Neighboring gene large ribosomal subunit protein eL39-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-galactose transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in pyrimidine nucleotide-sugar transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UDP-N-acetylglucosamine transporter

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029289425.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

Genomic

  1. NC_073249.2 Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

    Range
    126987780..127064633 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063599828.1 → XP_063455898.1  UDP-N-acetylglucosamine transporter isoform X6

  2. XM_057302861.2 → XP_057158844.1  UDP-N-acetylglucosamine transporter isoform X5

  3. XM_055115658.2 → XP_054971633.1  UDP-N-acetylglucosamine transporter isoform X3

  4. XM_003808467.6 → XP_003808515.1  UDP-N-acetylglucosamine transporter isoform X2

    UniProtKB/TrEMBL
    A0A2R9C031
    Related
    ENSPPAP00000035288.1
    Conserved Domains (1) summary
    pfam04142
    Location:43 → 355
    Nuc_sug_transp; Nucleotide-sugar transporter

  5. XM_055115660.3 → XP_054971635.1  UDP-N-acetylglucosamine transporter isoform X4

  6. XM_055115652.2 → XP_054971627.1  UDP-N-acetylglucosamine transporter isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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