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SIGLECL1 SIGLEC family like 1 [ Pan paniscus (pygmy chimpanzee) ]

Gene ID: 100971091, updated on 8-Mar-2024

Summary

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Gene symbol
SIGLECL1
Gene description
SIGLEC family like 1
See related
Ensembl:ENSPPAG00000021100
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan paniscus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See SIGLECL1 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanPan1-v2.0_pri (GCF_029289425.2) 20 NC_073269.2 (57303190..57307712)
RS_2023_05 previous assembly NHGRI_mPanPan1-v1.1-0.1.freeze_pri (GCF_029289425.1) 19 NC_073268.1 (59224672..59229193)

Chromosome 20 - NC_073269.2Genomic Context describing neighboring genes Neighboring gene myeloid cell surface antigen CD33-like Neighboring gene myeloid cell surface antigen CD33 Neighboring gene SIGLEC family-like protein 1 Neighboring gene IgLON family member 5 Neighboring gene V-set and immunoglobulin domain containing 10 like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sialic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: SIGLEC family-like protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029289425.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

Genomic

  1. NC_073269.2 Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

    Range
    57303190..57307712
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024926734.3 → XP_024782502.2  LOW QUALITY PROTEIN: SIGLEC family-like protein 1

    UniProtKB/TrEMBL
    A0A2R8ZM98
    Conserved Domains (2) summary
    cd00096
    Location:23 → 27
    Ig; Ig strand B [structural motif]
    cl11960
    Location:21 → 91
    Ig; Immunoglobulin domain
Nucleotide Protein
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