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GPD2 glycerol-3-phosphate dehydrogenase 2 [ Pan paniscus (pygmy chimpanzee) ]

Gene ID: 100970779, updated on 6-Jun-2024

Summary

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Gene symbol
GPD2
Gene description
glycerol-3-phosphate dehydrogenase 2
See related
Ensembl:ENSPPAG00000030269
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan paniscus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See GPD2 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
20
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanPan1-v2.0_pri (GCF_029289425.2) 13 NC_073262.2 (59103098..59254023)
RS_2023_05 previous assembly NHGRI_mPanPan1-v1.1-0.1.freeze_pri (GCF_029289425.1) 2B NC_073251.1 (59118153..59268997)

Chromosome 13 - NC_073262.2Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA U13 Neighboring gene small nucleolar RNA U13 Neighboring gene uncharacterized LOC117979312 Neighboring gene uncharacterized LOC134728678 Neighboring gene large ribosomal subunit protein uL10-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glycerol-3-phosphate dehydrogenase (quinone) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycerol-3-phosphate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of glycerol-3-phosphate dehydrogenase (FAD) complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycerol-3-phosphate dehydrogenase, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029289425.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

Genomic

  1. NC_073262.2 Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

    Range
    59103098..59254023
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003832714.5 → XP_003832762.1  glycerol-3-phosphate dehydrogenase, mitochondrial isoform X1

    See identical proteins and their annotated locations for XP_003832762.1

    UniProtKB/TrEMBL
    A0A2R9AAI5, A0A2R9AFW8
    Related
    ENSPPAP00000014232.1
    Conserved Domains (2) summary
    PLN02464
    Location:1 → 599
    PLN02464; glycerol-3-phosphate dehydrogenase
    cd00051
    Location:627 → 689
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...

  2. XM_003832713.5 → XP_003832761.1  glycerol-3-phosphate dehydrogenase, mitochondrial isoform X1

    See identical proteins and their annotated locations for XP_003832761.1

    UniProtKB/TrEMBL
    A0A2R9AAI5, A0A2R9AFW8
    Conserved Domains (2) summary
    PLN02464
    Location:1 → 599
    PLN02464; glycerol-3-phosphate dehydrogenase
    cd00051
    Location:627 → 689
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...

  3. XM_008958134.5 → XP_008956382.1  glycerol-3-phosphate dehydrogenase, mitochondrial isoform X1

    See identical proteins and their annotated locations for XP_008956382.1

    UniProtKB/TrEMBL
    A0A2R9AAI5, A0A2R9AFW8
    Related
    ENSPPAP00000014278.1
    Conserved Domains (2) summary
    PLN02464
    Location:1 → 599
    PLN02464; glycerol-3-phosphate dehydrogenase
    cd00051
    Location:627 → 689
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...

  4. XM_063595376.1 → XP_063451446.1  glycerol-3-phosphate dehydrogenase, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A2R9AAI5, A0A2R9AFW8

  5. XM_055108598.2 → XP_054964573.1  glycerol-3-phosphate dehydrogenase, mitochondrial isoform X2

    UniProtKB/TrEMBL
    A0A2R9AAI5

RNA

  1. XR_010109463.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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