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XPO1 exportin 1 [ Pan paniscus (pygmy chimpanzee) ]

Gene ID: 100970411, updated on 8-Mar-2024

Summary

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Gene symbol
XPO1
Gene description
exportin 1
See related
Ensembl:ENSPPAG00000029699
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan paniscus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See XPO1 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
28
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanPan1-v2.0_pri (GCF_029289425.2) 12 NC_073261.2 (64845566..64906271)
RS_2023_05 previous assembly NHGRI_mPanPan1-v1.1-0.1.freeze_pri (GCF_029289425.1) 2A NC_073250.1 (64849384..64910222)

Chromosome 12 - NC_073261.2Genomic Context describing neighboring genes Neighboring gene large ribosomal subunit protein eL14-like Neighboring gene U6 spliceosomal RNA Neighboring gene ubiquitin specific peptidase 34 Neighboring gene small nucleolar RNA SNORA70 Neighboring gene activator of HSP90 ATPase homolog 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nuclear export signal receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables small GTPase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein export from nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ribosomal large subunit export from nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ribosomal small subunit export from nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
exportin-1
Names
exportin 1 (CRM1 homolog, yeast)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029289425.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

Genomic

  1. NC_073261.2 Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

    Range
    64845566..64906271
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_055108354.2 → XP_054964329.1  exportin-1 isoform X1

    UniProtKB/TrEMBL
    A0A2R9AC81

  2. XM_034953220.3 → XP_034809111.1  exportin-1 isoform X1

    UniProtKB/TrEMBL
    A0A2R9AC81
    Conserved Domains (1) summary
    COG5101
    Location:15 → 1049
    CRM1; Importin beta-related nuclear transport receptor [Nuclear structure / Intracellular trafficking and secretion]

  3. XM_003830870.6 → XP_003830918.1  exportin-1 isoform X1

    See identical proteins and their annotated locations for XP_003830918.1

    UniProtKB/TrEMBL
    A0A2R9AC81
    Related
    ENSPPAP00000013077.1
    Conserved Domains (1) summary
    COG5101
    Location:15 → 1049
    CRM1; Importin beta-related nuclear transport receptor [Nuclear structure / Intracellular trafficking and secretion]

  4. XM_055108355.1 → XP_054964330.1  exportin-1 isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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