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CHST9 carbohydrate sulfotransferase 9 [ Pan paniscus (pygmy chimpanzee) ]

Gene ID: 100969623, updated on 10-Oct-2024

Summary

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Gene symbol
CHST9
Gene description
carbohydrate sulfotransferase 9
See related
Ensembl:ENSPPAG00000030236
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan paniscus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See CHST9 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanPan1-v2.0_pri (GCF_029289425.2) 17 NC_073266.2 (44346681..44616160, complement)
RS_2023_05 previous assembly NHGRI_mPanPan1-v1.1-0.1.freeze_pri (GCF_029289425.1) 18 NC_073267.1 (30039276..30308755, complement)

Chromosome 17 - NC_073266.2Genomic Context describing neighboring genes Neighboring gene ubiquitin recognition factor in ER-associated degradation protein 1-like Neighboring gene uncharacterized LOC100971672 Neighboring gene aquaporin 4 Neighboring gene uncharacterized LOC130540988 Neighboring gene pre-mRNA-splicing factor RBM22-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbohydrate sulfotransferase 9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029289425.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

Genomic

  1. NC_073266.2 Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

    Range
    44346681..44616160 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_055102565.1 → XP_054958540.1  carbohydrate sulfotransferase 9 isoform X3

  2. XM_055102564.1 → XP_054958539.1  carbohydrate sulfotransferase 9 isoform X2

  3. XM_057300453.1 → XP_057156436.1  carbohydrate sulfotransferase 9 isoform X4

  4. XM_003830268.4 → XP_003830316.2  carbohydrate sulfotransferase 9 isoform X1

    UniProtKB/TrEMBL
    A0A2R9AA59
    Conserved Domains (1) summary
    pfam03567
    Location:209 → 438
    Sulfotransfer_2; Sulfotransferase family

  5. XM_055102566.2 → XP_054958541.1  carbohydrate sulfotransferase 9 isoform X3

  6. XM_008955724.4 → XP_008953972.2  carbohydrate sulfotransferase 9 isoform X3

    UniProtKB/TrEMBL
    A0A2R9AA59
    Conserved Domains (1) summary
    pfam03567
    Location:124 → 353
    Sulfotransfer_2; Sulfotransferase family
Nucleotide Protein
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