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PIGC phosphatidylinositol glycan anchor biosynthesis class C [ Pan paniscus (pygmy chimpanzee) ]

Gene ID: 100969219, updated on 8-Mar-2024

Summary

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Gene symbol
PIGC
Gene description
phosphatidylinositol glycan anchor biosynthesis class C
See related
Ensembl:ENSPPAG00000024713
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan paniscus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See PIGC in Genome Data Viewer
Location:
chromosome: 1
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanPan1-v2.0_pri (GCF_029289425.2) 1 NC_073249.2 (77301941..77304688)
RS_2023_05 previous assembly NHGRI_mPanPan1-v1.1-0.1.freeze_pri (GCF_029289425.1) 1 NC_073249.1 (76982114..76984790)

Chromosome 1 - NC_073249.2Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene SUN domain containing ossification factor Neighboring gene chromosome 1 C1orf105 homolog Neighboring gene U6 spliceosomal RNA Neighboring gene dynamin 3 Neighboring gene uncharacterized LOC117976300 Neighboring gene microRNA mir-199a

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidylinositol N-acetylglucosaminyltransferase subunit C

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029289425.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

Genomic

  1. NC_073249.2 Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

    Range
    77301941..77304688
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003824663.6 → XP_003824711.1  phosphatidylinositol N-acetylglucosaminyltransferase subunit C

    See identical proteins and their annotated locations for XP_003824711.1

    UniProtKB/TrEMBL
    A0A2R8ZMT7
    Related
    ENSPPAP00000006259.1
    Conserved Domains (1) summary
    pfam06432
    Location:14 → 284
    GPI2; Phosphatidylinositol N-acetylglucosaminyltransferase

  2. XM_057302094.1 → XP_057158077.1  phosphatidylinositol N-acetylglucosaminyltransferase subunit C

    UniProtKB/TrEMBL
    A0A2R8ZMT7
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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