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C1GALT1C1 C1GALT1 specific chaperone 1 [ Pan paniscus (pygmy chimpanzee) ]

Gene ID: 100969207, updated on 8-Mar-2024

Summary

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Gene symbol
C1GALT1C1
Gene description
C1GALT1 specific chaperone 1
See related
Ensembl:ENSPPAG00000022632
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan paniscus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See C1GALT1C1 in Genome Data Viewer
Location:
chromosome: X
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanPan1-v2.0_pri (GCF_029289425.2) X NC_073272.2 (120180679..120185307, complement)
RS_2023_05 previous assembly NHGRI_mPanPan1-v1.1-0.1.freeze_pri (GCF_029289425.1) X NC_073272.1 (120184283..120188593, complement)

Chromosome X - NC_073272.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC117977718 Neighboring gene uncharacterized LOC134729786 Neighboring gene small nucleolar RNA U3 Neighboring gene MCTS1 re-initiation and release factor Neighboring gene glutaredoxin-related protein 5, mitochondrial-like Neighboring gene proliferation-associated protein 2G4-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in O-glycan processing, core 1 IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C1GALT1-specific chaperone 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029289425.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

Genomic

  1. NC_073272.2 Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

    Range
    120180679..120185307 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003823133.5 → XP_003823181.1  C1GALT1-specific chaperone 1

    See identical proteins and their annotated locations for XP_003823181.1

    UniProtKB/TrEMBL
    A0A2R8ZKG6
    Related
    ENSPPAP00000005458.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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