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PPT1 palmitoyl-protein thioesterase 1 [ Pan paniscus (pygmy chimpanzee) ]

Gene ID: 100969155, updated on 8-Mar-2024

Summary

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Gene symbol
PPT1
Gene description
palmitoyl-protein thioesterase 1
See related
Ensembl:ENSPPAG00000040559
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan paniscus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See PPT1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanPan1-v2.0_pri (GCF_029289425.2) 1 NC_073249.2 (186729114..186753833)
RS_2023_05 previous assembly NHGRI_mPanPan1-v1.1-0.1.freeze_pri (GCF_029289425.1) 1 NC_073249.1 (185866794..185891455)

Chromosome 1 - NC_073249.2Genomic Context describing neighboring genes Neighboring gene RLF zinc finger Neighboring gene U6 spliceosomal RNA Neighboring gene ornithine decarboxylase antizyme 1-like Neighboring gene cyclase associated actin cytoskeleton regulatory protein 1 Neighboring gene small ribosomal subunit protein uS5-like Neighboring gene MFSD2 lysolipid transporter A, lysophospholipid

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables palmitoyl-(protein) hydrolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in nervous system development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein depalmitoylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in receptor-mediated endocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in lysosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
palmitoyl-protein thioesterase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029289425.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

Genomic

  1. NC_073249.2 Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

    Range
    186729114..186753833
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003815421.6 → XP_003815469.1  palmitoyl-protein thioesterase 1

    See identical proteins and their annotated locations for XP_003815469.1

    UniProtKB/TrEMBL
    A0A2R9C1E5, A0A2R9C1G0
    Related
    ENSPPAP00000035556.1
    Conserved Domains (1) summary
    pfam02089
    Location:34 → 283
    Palm_thioest; Palmitoyl protein thioesterase
Nucleotide Protein
Heading Accession and Version

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