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LOC100968901 large ribosomal subunit protein uL30-like [ Pan paniscus (pygmy chimpanzee) ]

Gene ID: 100968901, updated on 8-Mar-2024

Summary

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Gene symbol
LOC100968901
Gene description
large ribosomal subunit protein uL30-like
See related
Ensembl:ENSPPAG00000004251
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan paniscus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
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Genomic context

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See LOC100968901 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanPan1-v2.0_pri (GCF_029289425.2) 6 NC_073255.2 (145359597..145360841)
RS_2023_05 previous assembly NHGRI_mPanPan1-v1.1-0.1.freeze_pri (GCF_029289425.1) 7 NC_073256.1 (193629966..193630811)

Chromosome 6 - NC_073255.2Genomic Context describing neighboring genes Neighboring gene laminin subunit beta 4 Neighboring gene neuronal cell adhesion molecule Neighboring gene U7 small nuclear RNA Neighboring gene patatin like phospholipase domain containing 8 Neighboring gene uncharacterized LOC117981071 Neighboring gene THAP domain containing 5 Neighboring gene DnaJ heat shock protein family (Hsp40) member B9

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cytosolic large ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
large ribosomal subunit protein uL30-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029289425.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

Genomic

  1. NC_073255.2 Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

    Range
    145359597..145360841
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034964822.3 → XP_034820713.1  large ribosomal subunit protein uL30-like

    UniProtKB/TrEMBL
    A0A2R8ZBW0
    Conserved Domains (1) summary
    TIGR01310
    Location:15 → 247
    uL30_euk; 60S ribosomal protein uL30, eukaryotic form
Nucleotide Protein
Heading Accession and Version

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