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HAO1 hydroxyacid oxidase 1 [ Pan paniscus (pygmy chimpanzee) ]

Gene ID: 100968377, updated on 8-Mar-2024

Summary

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Gene symbol
HAO1
Gene description
hydroxyacid oxidase 1
See related
Ensembl:ENSPPAG00000015346
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan paniscus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See HAO1 in Genome Data Viewer
Location:
chromosome: 21
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanPan1-v2.0_pri (GCF_029289425.2) 21 NC_073270.2 (8784614..8842467, complement)
RS_2023_05 previous assembly NHGRI_mPanPan1-v1.1-0.1.freeze_pri (GCF_029289425.1) 20 NC_073269.1 (8781441..8839294, complement)

Chromosome 21 - NC_073270.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC130541062 Neighboring gene serine/arginine-rich splicing factor 10-like Neighboring gene uncharacterized LOC129394944 Neighboring gene thioredoxin related transmembrane protein 4 Neighboring gene phospholipase C beta 1 Neighboring gene small nucleolar RNA SNORA73 family

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables FMN binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid alpha-oxidation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
2-Hydroxyacid oxidase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029289425.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

Genomic

  1. NC_073270.2 Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

    Range
    8784614..8842467 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003821359.5 → XP_003821407.1  2-Hydroxyacid oxidase 1

    See identical proteins and their annotated locations for XP_003821407.1

    UniProtKB/TrEMBL
    A0A2R8ZF43, A0A2R8ZFL4
    Related
    ENSPPAP00000003643.1
    Conserved Domains (1) summary
    pfam01070
    Location:15 → 362
    FMN_dh; FMN-dependent dehydrogenase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials