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ACSL6 acyl-CoA synthetase long chain family member 6 [ Pan paniscus (pygmy chimpanzee) ]

Gene ID: 100967641, updated on 6-Jun-2024

Summary

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Gene symbol
ACSL6
Gene description
acyl-CoA synthetase long chain family member 6
See related
Ensembl:ENSPPAG00000040311
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan paniscus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See ACSL6 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
24
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanPan1-v2.0_pri (GCF_029289425.2) 4 NC_073253.2 (127268577..127330482, complement)
RS_2023_05 previous assembly NHGRI_mPanPan1-v1.1-0.1.freeze_pri (GCF_029289425.1) 5 NC_073254.1 (125408140..125470045, complement)

Chromosome 4 - NC_073253.2Genomic Context describing neighboring genes Neighboring gene folliculin interacting protein 1 Neighboring gene meiotic kinetochore factor Neighboring gene interleukin 3 Neighboring gene colony stimulating factor 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables long-chain fatty acid-CoA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in long-chain fatty acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
long-chain-fatty-acid--CoA ligase 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029289425.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

Genomic

  1. NC_073253.2 Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

    Range
    127268577..127330482 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_055112622.2 → XP_054968597.1  long-chain-fatty-acid--CoA ligase 6 isoform X5

    UniProtKB/TrEMBL
    A0A2R9C076

  2. XM_055112623.1 → XP_054968598.1  long-chain-fatty-acid--CoA ligase 6 isoform X6

    UniProtKB/TrEMBL
    A0A2R9BZP2

  3. XM_055112621.2 → XP_054968596.2  long-chain-fatty-acid--CoA ligase 6 isoform X2

    UniProtKB/TrEMBL
    A0A2R9BZP2

  4. XM_055112620.2 → XP_054968595.2  long-chain-fatty-acid--CoA ligase 6 isoform X1

    UniProtKB/TrEMBL
    A0A2R9C076

  5. XM_055112626.2 → XP_054968601.2  long-chain-fatty-acid--CoA ligase 6 isoform X9

    UniProtKB/TrEMBL
    A0A2R9C076

  6. XM_055112625.1 → XP_054968600.1  long-chain-fatty-acid--CoA ligase 6 isoform X8

    UniProtKB/TrEMBL
    A0A2R9BZP2

  7. XM_055112624.1 → XP_054968599.1  long-chain-fatty-acid--CoA ligase 6 isoform X7

    UniProtKB/TrEMBL
    A0A2R9C076, A0A2R9C9R9

  8. XM_008954685.4 → XP_008952933.2  long-chain-fatty-acid--CoA ligase 6 isoform X4

    UniProtKB/TrEMBL
    A0A2R9BZP2
    Conserved Domains (1) summary
    cd05927
    Location:141 → 719
    LC-FACS_euk; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)

  9. XM_008954682.4 → XP_008952930.2  long-chain-fatty-acid--CoA ligase 6 isoform X3

    UniProtKB/TrEMBL
    A0A2R9C076
    Conserved Domains (1) summary
    cd05927
    Location:141 → 719
    LC-FACS_euk; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)

  10. XM_008954684.5 → XP_008952932.1  long-chain-fatty-acid--CoA ligase 6 isoform X7

    See identical proteins and their annotated locations for XP_008952932.1

    UniProtKB/TrEMBL
    A0A2R9C076, A0A2R9C9R9
    Related
    ENSPPAP00000035124.1
    Conserved Domains (2) summary
    PLN02736
    Location:72 → 694
    PLN02736; long-chain acyl-CoA synthetase
    cd05927
    Location:116 → 693
    LC-FACS_euk; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)
Nucleotide Protein
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