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CTNS cystinosin, lysosomal cystine transporter [ Otolemur garnettii (small-eared galago) ]

Gene ID: 100965339, updated on 8-Mar-2024

Summary

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Gene symbol
CTNS
Gene description
cystinosin, lysosomal cystine transporter
See related
Ensembl:ENSOGAG00000004450
Gene type
protein coding
RefSeq status
MODEL
Organism
Otolemur garnettii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lorisiformes; Galagidae; Otolemur
Orthologs
human mouse all
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Genomic context

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See CTNS in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
102 current OtoGar3 (GCF_000181295.1) Unplaced Scaffold NW_003852540.1 (2197989..2216758, complement)

NW_003852540.1Genomic Context describing neighboring genes Neighboring gene Tax1 binding protein 3 Neighboring gene ER membrane protein complex subunit 6 Neighboring gene sedoheptulokinase Neighboring gene transient receptor potential cation channel subfamily V member 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003852540 Unplaced Scaffold Reference OtoGar3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-cystine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in L-cystine transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in lysosomal membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cystinosin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Otolemur garnettii Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OtoGar3

Genomic

  1. NW_003852540.1 Reference OtoGar3

    Range
    2197989..2216758 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023518694.1 → XP_023374462.1  cystinosin isoform X1

    Conserved Domains (1) summary
    TIGR00951
    Location:125 → 357
    2A43; Lysosomal Cystine Transporter

  2. XM_003799116.3 → XP_003799164.1  cystinosin isoform X1

    Conserved Domains (1) summary
    TIGR00951
    Location:125 → 357
    2A43; Lysosomal Cystine Transporter

  3. XM_023518696.1 → XP_023374464.1  cystinosin isoform X2

    UniProtKB/TrEMBL
    H0WPX5
    Related
    ENSOGAP00000003975.2, ENSOGAT00000004454.2
    Conserved Domains (1) summary
    TIGR00951
    Location:125 → 357
    2A43; Lysosomal Cystine Transporter
Nucleotide Protein
Heading Accession and Version

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