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ARL6 ARF like GTPase 6 [ Otolemur garnettii (small-eared galago) ]

Gene ID: 100964633, updated on 28-Sep-2024

Summary

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Gene symbol
ARL6
Gene description
ARF like GTPase 6
See related
Ensembl:ENSOGAG00000000536
Gene type
protein coding
RefSeq status
MODEL
Organism
Otolemur garnettii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lorisiformes; Galagidae; Otolemur
Orthologs
human mouse all
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Genomic context

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See ARL6 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
102 current OtoGar3 (GCF_000181295.1) Unplaced Scaffold NW_003852404.1 (36090074..36121706)

NW_003852404.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene ephrin type-A receptor 6 Neighboring gene U6atac minor spliceosomal RNA Neighboring gene crystallin beta-gamma domain containing 3 Neighboring gene ribosomal oxygenase 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003852404 Unplaced Scaffold Reference OtoGar3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cilium assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein localization to cilium IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in axoneme IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ADP-ribosylation factor-like protein 6
Names
ADP ribosylation factor like GTPase 6
ARL6 interacting reticulophagy regulator 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Otolemur garnettii Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OtoGar3

Genomic

  1. NW_003852404.1 Reference OtoGar3

    Range
    36090074..36121706
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003783941.3 → XP_003783989.1  ADP-ribosylation factor-like protein 6

    See identical proteins and their annotated locations for XP_003783989.1

    UniProtKB/TrEMBL
    H0WGM3
    Related
    ENSOGAP00000000480.2, ENSOGAT00000000537.2
    Conserved Domains (2) summary
    smart00178
    Location:11 → 181
    SAR; Sar1p-like members of the Ras-family of small GTPases
    cd04157
    Location:19 → 180
    Arl6; Arf-like 6 (Arl6) GTPase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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