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FREM1 FRAS1 related extracellular matrix 1 [ Otolemur garnettii (small-eared galago) ]

Gene ID: 100964618, updated on 8-Mar-2024

Summary

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Gene symbol
FREM1
Gene description
FRAS1 related extracellular matrix 1
See related
Ensembl:ENSOGAG00000011871
Gene type
protein coding
RefSeq status
MODEL
Organism
Otolemur garnettii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lorisiformes; Galagidae; Otolemur
Orthologs
human mouse all
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Genomic context

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See FREM1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
36
Annotation release Status Assembly Chr Location
102 current OtoGar3 (GCF_000181295.1) Unplaced Scaffold NW_003852401.1 (12601893..12726520)

NW_003852401.1Genomic Context describing neighboring genes Neighboring gene tetratricopeptide repeat domain 39B Neighboring gene transcription initiation factor TFIID subunit 9-like Neighboring gene myosin light chain 6B pseudogene Neighboring gene cerberus 1, DAN family BMP antagonist Neighboring gene zinc finger DHHC-type palmitoyltransferase 21

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003852401 Unplaced Scaffold Reference OtoGar3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cell communication IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
FRAS1-related extracellular matrix protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Otolemur garnettii Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OtoGar3

Genomic

  1. NW_003852401.1 Reference OtoGar3

    Range
    12601893..12726520
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003782873.2 → XP_003782921.1  FRAS1-related extracellular matrix protein 1

    UniProtKB/TrEMBL
    H0X5Q1
    Related
    ENSOGAP00000010628.2, ENSOGAT00000011883.2
    Conserved Domains (3) summary
    smart00034
    Location:2053 → 2175
    CLECT; C-type lectin (CTL) or carbohydrate-recognition domain (CRD)
    pfam16184
    Location:358 → 502
    Cadherin_3; Cadherin-like
    cl02522
    Location:1743 → 1829
    Calx-beta; Calx-beta domain
Nucleotide Protein
Heading Accession and Version

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