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LAMA1 laminin subunit alpha 1 [ Otolemur garnettii (small-eared galago) ]

Gene ID: 100964155, updated on 8-Mar-2024

Summary

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Gene symbol
LAMA1
Gene description
laminin subunit alpha 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Otolemur garnettii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lorisiformes; Galagidae; Otolemur
Orthologs
human mouse all
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Genomic context

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See LAMA1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
63
Annotation release Status Assembly Chr Location
102 current OtoGar3 (GCF_000181295.1) Unplaced Scaffold NW_003852448.1 (1900237..2058978, complement)

NW_003852448.1Genomic Context describing neighboring genes Neighboring gene 10 kDa heat shock protein, mitochondrial pseudogene Neighboring gene Rho GTPase activating protein 28 Neighboring gene 39S ribosomal protein L47, mitochondrial pseudogene Neighboring gene leucine rich repeat containing 30 Neighboring gene high mobility group protein B1 pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003852448 Unplaced Scaffold Reference OtoGar3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables extracellular matrix structural constituent IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables signaling receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in axon guidance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in blood vessel morphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in camera-type eye development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of embryonic development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in basement membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
laminin subunit alpha-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Otolemur garnettii Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OtoGar3

Genomic

  1. NW_003852448.1 Reference OtoGar3

    Range
    1900237..2058978 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012806468.1 → XP_012661922.1  laminin subunit alpha-1

    Conserved Domains (11) summary
    smart00136
    Location:2 → 251
    LamNT; Laminin N-terminal domain (domain VI)
    smart00180
    Location:934 → 978
    EGF_Lam; Laminin-type epidermal growth factor-like domai
    smart00281
    Location:1198 → 1327
    LamB; Laminin B domain
    cd00055
    Location:1492 → 1529
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    cd00110
    Location:2291 → 2447
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    pfam00052
    Location:551 → 679
    Laminin_B; Laminin B (Domain IV)
    pfam00053
    Location:885 → 931
    Laminin_EGF; Laminin EGF domain
    pfam00054
    Location:2727 → 2855
    Laminin_G_1; Laminin G domain
    pfam06008
    Location:1553 → 1809
    Laminin_I; Laminin Domain I
    pfam06009
    Location:1995 → 2129
    Laminin_II; Laminin Domain II
    pfam14942
    Location:1574 → 1658
    Muted; Organelle biogenesis, Muted-like protein
Nucleotide Protein
Heading Accession and Version

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