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CACNA2D1 calcium voltage-gated channel auxiliary subunit alpha2delta 1 [ Otolemur garnettii (small-eared galago) ]

Gene ID: 100963985, updated on 8-Mar-2024

Summary

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Gene symbol
CACNA2D1
Gene description
calcium voltage-gated channel auxiliary subunit alpha2delta 1
See related
Ensembl:ENSOGAG00000006002
Gene type
protein coding
RefSeq status
MODEL
Organism
Otolemur garnettii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lorisiformes; Galagidae; Otolemur
Orthologs
human mouse all
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Genomic context

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See CACNA2D1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
39
Annotation release Status Assembly Chr Location
102 current OtoGar3 (GCF_000181295.1) Unplaced Scaffold NW_003852400.1 (10282516..10784521, complement)

NW_003852400.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene hepatocyte growth factor Neighboring gene U6 spliceosomal RNA Neighboring gene U6 spliceosomal RNA Neighboring gene U6 spliceosomal RNA Neighboring gene U4 spliceosomal RNA Neighboring gene piccolo presynaptic cytomatrix protein Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003852400 Unplaced Scaffold Reference OtoGar3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables voltage-gated calcium channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of L-type voltage-gated calcium channel complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
voltage-dependent calcium channel subunit alpha-2/delta-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Otolemur garnettii Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OtoGar3

Genomic

  1. NW_003852400.1 Reference OtoGar3

    Range
    10282516..10784521 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003782628.2 → XP_003782676.1  voltage-dependent calcium channel subunit alpha-2/delta-1 isoform X1

    UniProtKB/TrEMBL
    H0WTB0
    Conserved Domains (5) summary
    cd01463
    Location:239 → 417
    vWA_VGCC_like; VWA Voltage gated Calcium channel like: Voltage-gated calcium channels are a complex of five proteins: alpha 1, beta 1, gamma, alpha 2 and delta. The alpha 2 and delta subunits result from proteolytic processing of a single gene product and carries at ...
    pfam02743
    Location:446 → 531
    Cache_1; Cache domain
    pfam08399
    Location:104 → 223
    VWA_N; VWA N-terminal
    pfam08473
    Location:543 → 627
    VGCC_alpha2; Neuronal voltage-dependent calcium channel alpha 2acd
    cl21471
    Location:636 → 816
    RAMP_I_III; CRISPR/Cas system-associated RAMP superfamily protein

  2. XM_012811373.2 → XP_012666827.1  voltage-dependent calcium channel subunit alpha-2/delta-1 isoform X2

    UniProtKB/TrEMBL
    H0WTB0
    Related
    ENSOGAP00000005371.2, ENSOGAT00000006009.2
    Conserved Domains (5) summary
    cd01463
    Location:239 → 417
    vWA_VGCC_like; VWA Voltage gated Calcium channel like: Voltage-gated calcium channels are a complex of five proteins: alpha 1, beta 1, gamma, alpha 2 and delta. The alpha 2 and delta subunits result from proteolytic processing of a single gene product and carries at ...
    pfam02743
    Location:446 → 531
    Cache_1; Cache domain
    pfam08399
    Location:104 → 223
    VWA_N; VWA N-terminal
    pfam08473
    Location:543 → 627
    VGCC_alpha2; Neuronal voltage-dependent calcium channel alpha 2acd
    cl21471
    Location:542 → 809
    RAMP_I_III; CRISPR/Cas system-associated RAMP superfamily protein
Nucleotide Protein
Heading Accession and Version

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