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ACADS acyl-CoA dehydrogenase short chain [ Otolemur garnettii (small-eared galago) ]

Gene ID: 100963935, updated on 18-Sep-2024

Summary

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Gene symbol
ACADS
Gene description
acyl-CoA dehydrogenase short chain
See related
Ensembl:ENSOGAG00000008536
Gene type
protein coding
RefSeq status
MODEL
Organism
Otolemur garnettii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lorisiformes; Galagidae; Otolemur
Orthologs
human mouse all
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Genomic context

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See ACADS in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
102 current OtoGar3 (GCF_000181295.1) Unplaced Scaffold NW_003852433.1 (7906442..7922285, complement)

NW_003852433.1Genomic Context describing neighboring genes Neighboring gene HNF1 homeobox A Neighboring gene signal peptide peptidase like 3 Neighboring gene U2 spliceosomal RNA Neighboring gene U6 spliceosomal RNA Neighboring gene unc-119 lipid binding chaperone B Neighboring gene malectin

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003852433 Unplaced Scaffold Reference OtoGar3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables flavin adenine dinucleotide binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in butyrate catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fatty acid beta-oxidation using acyl-CoA dehydrogenase IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
short-chain specific acyl-CoA dehydrogenase, mitochondrial
Names
acyl-CoA dehydrogenase, C-2 to C-3 short chain

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Otolemur garnettii Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OtoGar3

Genomic

  1. NW_003852433.1 Reference OtoGar3

    Range
    7906442..7922285 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003789905.3 → XP_003789953.1  short-chain specific acyl-CoA dehydrogenase, mitochondrial

    UniProtKB/TrEMBL
    H0WYP5
    Related
    ENSOGAP00000007648.2, ENSOGAT00000008540.2
    Conserved Domains (2) summary
    cd01158
    Location:36 → 408
    SCAD_SBCAD; Short chain acyl-CoA dehydrogenases and eukaryotic short/branched chain acyl-CoA dehydrogenases
    COG1960
    Location:33 → 412
    CaiA; Acyl-CoA dehydrogenase related to the alkylation response protein AidB [Lipid transport and metabolism]
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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