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HPGDS hematopoietic prostaglandin D synthase [ Otolemur garnettii (small-eared galago) ]

Gene ID: 100962092, updated on 8-Mar-2024

Summary

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Gene symbol
HPGDS
Gene description
hematopoietic prostaglandin D synthase
Gene type
protein coding
RefSeq status
MODEL
Organism
Otolemur garnettii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lorisiformes; Galagidae; Otolemur
Orthologs
human mouse all
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Genomic context

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See HPGDS in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
102 current OtoGar3 (GCF_000181295.1) Unplaced Scaffold NW_003852532.1 (459576..483385, complement)

NW_003852532.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA U13 Neighboring gene SNF2 related chromatin remodeling ATPase with DExD box 1 Neighboring gene PDZ and LIM domain 5 Neighboring gene U6 spliceosomal RNA Neighboring gene small nucleolar RNA SNORA40

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003852532 Unplaced Scaffold Reference OtoGar3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glutathione transferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glutathione metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hematopoietic prostaglandin D synthase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Otolemur garnettii Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OtoGar3

Genomic

  1. NW_003852532.1 Reference OtoGar3

    Range
    459576..483385 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023518400.1 → XP_023374168.1  hematopoietic prostaglandin D synthase

    Conserved Domains (2) summary
    cd03039
    Location:4 → 73
    GST_N_Sigma_like; GST_N family, Class Sigma_like; composed of GSTs belonging to class Sigma and similar proteins, including GSTs from class Mu, Pi and Alpha. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of ...
    cl02776
    Location:136 → 206
    GST_C_family; C-terminal, alpha helical domain of the Glutathione S-transferase family
Nucleotide Protein
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