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LOC100961603 N-acetyllactosaminide alpha-1,3-galactosyltransferase [ Otolemur garnettii (small-eared galago) ]

Gene ID: 100961603, updated on 22-Oct-2023

Summary

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Gene symbol
LOC100961603
Gene description
N-acetyllactosaminide alpha-1,3-galactosyltransferase
See related
Ensembl:ENSOGAG00000001891
Gene type
protein coding
RefSeq status
MODEL
Organism
Otolemur garnettii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lorisiformes; Galagidae; Otolemur
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Genomic context

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See LOC100961603 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
102 current OtoGar3 (GCF_000181295.1) Unplaced Scaffold NW_003852409.1 (24392616..24472448, complement)

NW_003852409.1Genomic Context describing neighboring genes Neighboring gene N-acetyllactosaminide alpha-1,3-galactosyltransferase-like 1 Neighboring gene N-acetyllactosaminide alpha-1,3-galactosyltransferase-like Neighboring gene DAB2 interacting protein Neighboring gene tubulin tyrosine ligase like 11

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003852409 Unplaced Scaffold Reference OtoGar3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipid glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
N-acetyllactosaminide alpha-1,3-galactosyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Otolemur garnettii Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OtoGar3

Genomic

  1. NW_003852409.1 Reference OtoGar3

    Range
    24392616..24472448 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023510616.1 → XP_023366384.1  N-acetyllactosaminide alpha-1,3-galactosyltransferase isoform X2

    UniProtKB/TrEMBL
    H0WJK4
    Related
    ENSOGAP00000001686.2, ENSOGAT00000001894.2
    Conserved Domains (1) summary
    cl11394
    Location:91 → 374
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  2. XM_003785264.2 → XP_003785312.1  N-acetyllactosaminide alpha-1,3-galactosyltransferase isoform X2

    UniProtKB/TrEMBL
    H0WJK4
    Conserved Domains (1) summary
    cl11394
    Location:91 → 374
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  3. XM_023510615.1 → XP_023366383.1  N-acetyllactosaminide alpha-1,3-galactosyltransferase isoform X1

    Conserved Domains (1) summary
    cl11394
    Location:101 → 384
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  4. XM_023510617.1 → XP_023366385.1  N-acetyllactosaminide alpha-1,3-galactosyltransferase isoform X3

    Conserved Domains (1) summary
    cl11394
    Location:42 → 325
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
Nucleotide Protein
Heading Accession and Version

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