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B4GALNT3 beta-1,4-N-acetyl-galactosaminyltransferase 3 [ Otolemur garnettii (small-eared galago) ]

Gene ID: 100961561, updated on 8-Mar-2024

Summary

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Gene symbol
B4GALNT3
Gene description
beta-1,4-N-acetyl-galactosaminyltransferase 3
See related
Ensembl:ENSOGAG00000001336
Gene type
protein coding
RefSeq status
MODEL
Organism
Otolemur garnettii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lorisiformes; Galagidae; Otolemur
Orthologs
human mouse all
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Genomic context

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See B4GALNT3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
19
Annotation release Status Assembly Chr Location
102 current OtoGar3 (GCF_000181295.1) Unplaced Scaffold NW_003852499.1 (6774507..6891269)

NW_003852499.1Genomic Context describing neighboring genes Neighboring gene transcription factor BTF3 homolog 4 pseudogene Neighboring gene lysine demethylase 5A Neighboring gene 40S ribosomal protein S15 pseudogene Neighboring gene coiled-coil domain containing 77 Neighboring gene ninjurin 2 Neighboring gene chromobox protein homolog 1 pseudogene Neighboring gene WNK lysine deficient protein kinase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003852499 Unplaced Scaffold Reference OtoGar3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylgalactosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi cisterna membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,4-N-acetylgalactosaminyltransferase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Otolemur garnettii Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OtoGar3

Genomic

  1. NW_003852499.1 Reference OtoGar3

    Range
    6774507..6891269
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012809313.1 → XP_012664767.1  beta-1,4-N-acetylgalactosaminyltransferase 3

    UniProtKB/TrEMBL
    H0WID7
    Related
    ENSOGAP00000001190.2, ENSOGAT00000001336.2
    Conserved Domains (2) summary
    cl08459
    Location:139 → 238
    PA14; PA14 domain
    cl11394
    Location:774 → 957
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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