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PI3 peptidase inhibitor 3 [ Otolemur garnettii (small-eared galago) ]

Gene ID: 100960046, updated on 8-Mar-2024

Summary

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Gene symbol
PI3
Gene description
peptidase inhibitor 3
See related
Ensembl:ENSOGAG00000006670
Gene type
protein coding
RefSeq status
MODEL
Organism
Otolemur garnettii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lorisiformes; Galagidae; Otolemur
Also known as
trappin-2
Orthologs
human all
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Genomic context

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See PI3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
102 current OtoGar3 (GCF_000181295.1) Unplaced Scaffold NW_003852418.1 (7401181..7402382)

NW_003852418.1Genomic Context describing neighboring genes Neighboring gene potassium voltage-gated channel modifier subfamily S member 1 Neighboring gene WAP four-disulfide core domain protein 5 Neighboring gene keratin, type I cytoskeletal 19 pseudogene Neighboring gene actin-related protein 10 pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003852418 Unplaced Scaffold Reference OtoGar3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of trappin genes in mammals. Kato A, et al. BMC Evol Biol, 2010 Jan 29. PMID 20113469, Free PMC Article
  2. Comparative sequence analyses reveal rapid and divergent evolutionary changes of the WFDC locus in the primate lineage. Hurle B, et al. Genome Res, 2007 Mar. PMID 17267810, Free PMC Article
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables peptidase inhibitor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in antibacterial humoral response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in innate immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
elafin
Names
elafin preproprotein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Otolemur garnettii Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OtoGar3

Genomic

  1. NW_003852418.1 Reference OtoGar3

    Range
    7401181..7402382
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003787630.1 → XP_003787678.1  elafin

    See identical proteins and their annotated locations for XP_003787678.1

    UniProtKB/TrEMBL
    A4K2Q8
    Related
    ENSOGAP00000005964.1, ENSOGAT00000006669.1
    Conserved Domains (1) summary
    smart00217
    Location:72 → 117
    WAP; Four-disulfide core domains
Nucleotide Protein
Heading Accession and Version

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