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RAB9B RAB9B, member RAS oncogene family [ Otolemur garnettii (small-eared galago) ]

Gene ID: 100958240, updated on 8-Mar-2024

Summary

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Gene symbol
RAB9B
Gene description
RAB9B, member RAS oncogene family
See related
Ensembl:ENSOGAG00000015082
Gene type
protein coding
RefSeq status
MODEL
Organism
Otolemur garnettii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lorisiformes; Galagidae; Otolemur
Orthologs
human mouse all
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Genomic context

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See RAB9B in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
102 current OtoGar3 (GCF_000181295.1) Unplaced Scaffold NW_003852643.1 (59318..69382)

NW_003852643.1Genomic Context describing neighboring genes Neighboring gene developmental pluripotency-associated protein 4 pseudogene Neighboring gene proteolipid protein 1 Neighboring gene ATP synthase subunit g, mitochondrial pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003852643 Unplaced Scaffold Reference OtoGar3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Rab protein signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in retrograde transport, endosome to Golgi IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in late endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lysosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in phagocytic vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ras-related protein Rab-9B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Otolemur garnettii Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OtoGar3

Genomic

  1. NW_003852643.1 Reference OtoGar3

    Range
    59318..69382
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003802494.3 → XP_003802542.1  ras-related protein Rab-9B

    See identical proteins and their annotated locations for XP_003802542.1

    UniProtKB/TrEMBL
    H0XCI1
    Related
    ENSOGAP00000013500.2, ENSOGAT00000015083.2
    Conserved Domains (2) summary
    smart00175
    Location:8 → 174
    RAB; Rab subfamily of small GTPases
    cd04116
    Location:3 → 172
    Rab9; Rab GTPase family 9 (Rab9)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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