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NT5M 5',3'-nucleotidase, mitochondrial [ Otolemur garnettii (small-eared galago) ]

Gene ID: 100954308, updated on 8-Mar-2024

Summary

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Gene symbol
NT5M
Gene description
5',3'-nucleotidase, mitochondrial
See related
Ensembl:ENSOGAG00000008373
Gene type
protein coding
RefSeq status
MODEL
Organism
Otolemur garnettii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lorisiformes; Galagidae; Otolemur
Orthologs
human mouse all
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Genomic context

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See NT5M in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
102 current OtoGar3 (GCF_000181295.1) Unplaced Scaffold NW_003852441.1 (129505..163838)

NW_003852441.1Genomic Context describing neighboring genes Neighboring gene NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial-like Neighboring gene COP9 signalosome subunit 3 Neighboring gene mediator complex subunit 9 Neighboring gene ras related dexamethasone induced 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003852441 Unplaced Scaffold Reference OtoGar3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 5'-nucleotidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in pyrimidine deoxyribonucleotide catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
5'(3')-deoxyribonucleotidase, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Otolemur garnettii Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OtoGar3

Genomic

  1. NW_003852441.1 Reference OtoGar3

    Range
    129505..163838
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012806027.2 → XP_012661481.1  5'(3')-deoxyribonucleotidase, mitochondrial

    Conserved Domains (2) summary
    pfam00702
    Location:42 → 172
    Hydrolase; haloacid dehalogenase-like hydrolase
    cl21460
    Location:42 → 229
    HAD_like; Haloacid Dehalogenase-like Hydrolases

RNA

  1. XR_002773681.1 RNA Sequence

    Related
    ENSOGAT00000008377.2
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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