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DERA deoxyribose-phosphate aldolase [ Otolemur garnettii (small-eared galago) ]

Gene ID: 100953904, updated on 8-Mar-2024

Summary

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Gene symbol
DERA
Gene description
deoxyribose-phosphate aldolase
See related
Ensembl:ENSOGAG00000013161
Gene type
protein coding
RefSeq status
MODEL
Organism
Otolemur garnettii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lorisiformes; Galagidae; Otolemur
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
102 current OtoGar3 (GCF_000181295.1) Unplaced Scaffold NW_003852519.1 (4506834..4605942)

NW_003852519.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene serine/threonine kinase receptor associated protein Neighboring gene U4/U6 small nuclear ribonucleoprotein Prp31 pseudogene Neighboring gene solute carrier family 15 member 5 Neighboring gene microsomal glutathione S-transferase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003852519 Unplaced Scaffold Reference OtoGar3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables deoxyribose-phosphate aldolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in deoxyribonucleotide catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
deoxyribose-phosphate aldolase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Otolemur garnettii Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OtoGar3

Genomic

  1. NW_003852519.1 Reference OtoGar3

    Range
    4506834..4605942
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023517913.1 → XP_023373681.1  deoxyribose-phosphate aldolase isoform X1

    UniProtKB/TrEMBL
    H0X8G9
    Conserved Domains (1) summary
    cd00959
    Location:58 → 285
    DeoC; 2-deoxyribose-5-phosphate aldolase (DERA) of the DeoC family

  2. XM_023517914.1 → XP_023373682.1  deoxyribose-phosphate aldolase isoform X2

    UniProtKB/TrEMBL
    H0X8G9
    Related
    ENSOGAP00000011792.2, ENSOGAT00000013165.2
    Conserved Domains (1) summary
    cd00959
    Location:43 → 270
    DeoC; 2-deoxyribose-5-phosphate aldolase (DERA) of the DeoC family
Nucleotide Protein
Heading Accession and Version

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