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GALNT6 polypeptide N-acetylgalactosaminyltransferase 6 [ Otolemur garnettii (small-eared galago) ]

Gene ID: 100953554, updated on 8-Mar-2024

Summary

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Gene symbol
GALNT6
Gene description
polypeptide N-acetylgalactosaminyltransferase 6
See related
Ensembl:ENSOGAG00000008000
Gene type
protein coding
RefSeq status
MODEL
Organism
Otolemur garnettii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lorisiformes; Galagidae; Otolemur
Orthologs
human mouse all
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Genomic context

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See GALNT6 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
102 current OtoGar3 (GCF_000181295.1) Unplaced Scaffold NW_003852438.1 (5666011..5710292, complement)

NW_003852438.1Genomic Context describing neighboring genes Neighboring gene cyclin-dependent kinases regulatory subunit 1 pseudogene Neighboring gene bridging integrator 2 Neighboring gene chymotrypsin like elastase 1 Neighboring gene solute carrier family 4 member 8 Neighboring gene sodium voltage-gated channel alpha subunit 8 Neighboring gene 60S ribosomal protein L23a pseudogene Neighboring gene glucosamine 6-phosphate N-acetyltransferase pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003852438 Unplaced Scaffold Reference OtoGar3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase 6
Names
UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 6 (GalNAc-T6)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Otolemur garnettii Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OtoGar3

Genomic

  1. NW_003852438.1 Reference OtoGar3

    Range
    5666011..5710292 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003790393.3 → XP_003790441.1  polypeptide N-acetylgalactosaminyltransferase 6

    UniProtKB/TrEMBL
    H0WXH7
    Related
    ENSOGAP00000007160.2, ENSOGAT00000008004.2
    Conserved Domains (3) summary
    cd02510
    Location:180 → 485
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    cd00161
    Location:499 → 621
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
    pfam00652
    Location:497 → 619
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
Nucleotide Protein
Heading Accession and Version

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