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AGPS alkylglycerone phosphate synthase [ Otolemur garnettii (small-eared galago) ]

Gene ID: 100951879, updated on 8-Mar-2024

Summary

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Gene symbol
AGPS
Gene description
alkylglycerone phosphate synthase
See related
Ensembl:ENSOGAG00000013184
Gene type
protein coding
RefSeq status
MODEL
Organism
Otolemur garnettii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lorisiformes; Galagidae; Otolemur
Orthologs
human mouse all
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Genomic context

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See AGPS in Genome Data Viewer
Location:
chromosome: Un
Exon count:
20
Annotation release Status Assembly Chr Location
102 current OtoGar3 (GCF_000181295.1) Unplaced Scaffold NW_003852443.1 (8900996..9020109, complement)

NW_003852443.1Genomic Context describing neighboring genes Neighboring gene phosphodiesterase 11A Neighboring gene tetratricopeptide repeat protein 30A Neighboring gene NFE2 like bZIP transcription factor 2 Neighboring gene heterogeneous nuclear ribonucleoprotein A3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003852443 Unplaced Scaffold Reference OtoGar3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables FAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables alkylglycerone-phosphate synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alkyldihydroxyacetonephosphate synthase, peroxisomal

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Otolemur garnettii Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OtoGar3

Genomic

  1. NW_003852443.1 Reference OtoGar3

    Range
    8900996..9020109 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012806180.2 → XP_012661634.1  alkyldihydroxyacetonephosphate synthase, peroxisomal

    UniProtKB/TrEMBL
    H0X8I6
    Related
    ENSOGAP00000011813.2, ENSOGAT00000013186.2
    Conserved Domains (3) summary
    COG0277
    Location:196 → 616
    GlcD; FAD/FMN-containing dehydrogenase [Energy production and conversion]
    pfam01565
    Location:202 → 343
    FAD_binding_4; FAD binding domain
    pfam02913
    Location:381 → 621
    FAD-oxidase_C; FAD linked oxidases, C-terminal domain
Nucleotide Protein
Heading Accession and Version

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