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SLC39A8 solute carrier family 39 member 8 [ Otolemur garnettii (small-eared galago) ]

Gene ID: 100950746, updated on 8-Mar-2024

Summary

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Gene symbol
SLC39A8
Gene description
solute carrier family 39 member 8
See related
Ensembl:ENSOGAG00000008343
Gene type
protein coding
RefSeq status
MODEL
Organism
Otolemur garnettii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lorisiformes; Galagidae; Otolemur
Orthologs
human mouse all
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Genomic context

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See SLC39A8 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
102 current OtoGar3 (GCF_000181295.1) Unplaced Scaffold NW_003852498.1 (1776433..1836989, complement)

NW_003852498.1Genomic Context describing neighboring genes Neighboring gene protein phosphatase 3 catalytic subunit alpha Neighboring gene B cell scaffold protein with ankyrin repeats 1 Neighboring gene nuclear factor kappa B subunit 1 Neighboring gene ribosome biogenesis protein NSA2 homolog Neighboring gene mannosidase beta

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003852498 Unplaced Scaffold Reference OtoGar3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables zinc ion transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular zinc ion homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in zinc ion import across plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc transporter ZIP8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Otolemur garnettii Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OtoGar3

Genomic

  1. NW_003852498.1 Reference OtoGar3

    Range
    1776433..1836989 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023517044.1 → XP_023372812.1  zinc transporter ZIP8

    UniProtKB/TrEMBL
    H0WYA1
    Related
    ENSOGAP00000007474.2, ENSOGAT00000008349.2
    Conserved Domains (1) summary
    pfam02535
    Location:126 → 451
    Zip; ZIP Zinc transporter

  2. XM_023517043.1 → XP_023372811.1  zinc transporter ZIP8

    UniProtKB/TrEMBL
    H0WYA1
    Conserved Domains (1) summary
    pfam02535
    Location:126 → 451
    Zip; ZIP Zinc transporter
Nucleotide Protein
Heading Accession and Version

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