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CA4 carbonic anhydrase 4 [ Otolemur garnettii (small-eared galago) ]

Gene ID: 100949481, updated on 8-Mar-2024

Summary

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Gene symbol
CA4
Gene description
carbonic anhydrase 4
See related
Ensembl:ENSOGAG00000003438
Gene type
protein coding
RefSeq status
MODEL
Organism
Otolemur garnettii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lorisiformes; Galagidae; Otolemur
Orthologs
human mouse all
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Genomic context

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See CA4 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
102 current OtoGar3 (GCF_000181295.1) Unplaced Scaffold NW_003852489.1 (6060907..6069129, complement)

NW_003852489.1Genomic Context describing neighboring genes Neighboring gene ubiquitin specific peptidase 32 Neighboring gene small nucleolar RNA SNORD113/SNORD114 family Neighboring gene U1 spliceosomal RNA Neighboring gene zinc finger HIT-type containing 3 Neighboring gene myosin XIX

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003852489 Unplaced Scaffold Reference OtoGar3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables carbonate dehydratase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbonic anhydrase 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Otolemur garnettii Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OtoGar3

Genomic

  1. NW_003852489.1 Reference OtoGar3

    Range
    6060907..6069129 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003795604.3 → XP_003795652.1  carbonic anhydrase 4

    UniProtKB/TrEMBL
    H0WMS5
    Related
    ENSOGAP00000003066.2, ENSOGAT00000003441.2
    Conserved Domains (1) summary
    cl00012
    Location:48 → 285
    alpha_CA; Carbonic anhydrase alpha (vertebrate-like) group. Carbonic anhydrases (CAs) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism: a nucleophilic attack of a zinc-bound hydroxide ion on carbon ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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