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ZCCHC2 zinc finger CCHC-type containing 2 [ Otolemur garnettii (small-eared galago) ]

Gene ID: 100947760, updated on 8-Mar-2024

Summary

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Gene symbol
ZCCHC2
Gene description
zinc finger CCHC-type containing 2
See related
Ensembl:ENSOGAG00000024641
Gene type
protein coding
RefSeq status
MODEL
Organism
Otolemur garnettii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lorisiformes; Galagidae; Otolemur
Orthologs
human mouse all
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Genomic context

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See ZCCHC2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
102 current OtoGar3 (GCF_000181295.1) Unplaced Scaffold NW_003852422.1 (13238848..13298032, complement)

NW_003852422.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene PH domain and leucine rich repeat protein phosphatase 1 Neighboring gene rho GTPase-activating protein 9-like Neighboring gene 40S ribosomal protein S12 pseudogene Neighboring gene TNF receptor superfamily member 11a

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003852422 Unplaced Scaffold Reference OtoGar3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylinositol binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger CCHC domain-containing protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Otolemur garnettii Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OtoGar3

Genomic

  1. NW_003852422.1 Reference OtoGar3

    Range
    13238848..13298032 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023512368.1 → XP_023368136.1  zinc finger CCHC domain-containing protein 2 isoform X3

    UniProtKB/TrEMBL
    H0XYR6
    Conserved Domains (2) summary
    pfam00098
    Location:994 → 1009
    zf-CCHC; Zinc knuckle
    cl25496
    Location:528 → 862
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)

  2. XM_023512369.1 → XP_023368137.1  zinc finger CCHC domain-containing protein 2 isoform X4

    UniProtKB/TrEMBL
    H0XYR6
    Conserved Domains (2) summary
    pfam00098
    Location:990 → 1005
    zf-CCHC; Zinc knuckle
    cl25496
    Location:524 → 858
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)

  3. XM_023512367.1 → XP_023368135.1  zinc finger CCHC domain-containing protein 2 isoform X2

    UniProtKB/TrEMBL
    H0XYR6
    Conserved Domains (2) summary
    pfam00098
    Location:1017 → 1032
    zf-CCHC; Zinc knuckle
    cl25496
    Location:551 → 885
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)

  4. XM_023512370.1 → XP_023368138.1  zinc finger CCHC domain-containing protein 2 isoform X5

    Conserved Domains (2) summary
    pfam00098
    Location:975 → 990
    zf-CCHC; Zinc knuckle
    cl25496
    Location:509 → 843
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)

  5. XM_003788465.2 → XP_003788513.2  zinc finger CCHC domain-containing protein 2 isoform X1

    UniProtKB/TrEMBL
    H0XYR6
    Conserved Domains (2) summary
    cd06093
    Location:248 → 346
    PX_domain; The Phox Homology domain, a phosphoinositide binding module
    pfam00098
    Location:1018 → 1033
    zf-CCHC; Zinc knuckle

  6. XM_023512371.1 → XP_023368139.1  zinc finger CCHC domain-containing protein 2 isoform X6

    UniProtKB/TrEMBL
    H0XYR6
    Related
    ENSOGAP00000021259.1, ENSOGAT00000034971.1
    Conserved Domains (2) summary
    pfam00098
    Location:891 → 906
    zf-CCHC; Zinc knuckle
    cl26464
    Location:402 → 720
    Atrophin-1; Atrophin-1 family

RNA

  1. XR_002773052.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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