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GALK1 galactokinase 1 [ Otolemur garnettii (small-eared galago) ]

Gene ID: 100945752, updated on 8-Mar-2024

Summary

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Gene symbol
GALK1
Gene description
galactokinase 1
See related
Ensembl:ENSOGAG00000001918
Gene type
protein coding
RefSeq status
MODEL
Organism
Otolemur garnettii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lorisiformes; Galagidae; Otolemur
Orthologs
human mouse all
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Genomic context

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See GALK1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
102 current OtoGar3 (GCF_000181295.1) Unplaced Scaffold NW_003852413.1 (6172174..6177672)

NW_003852413.1Genomic Context describing neighboring genes Neighboring gene unk zinc finger Neighboring gene histone H3.3 Neighboring gene cytochrome c oxidase copper chaperone pseudogene Neighboring gene integrin subunit beta 4 Neighboring gene SAP30 binding protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003852413 Unplaced Scaffold Reference OtoGar3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables galactokinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in galactose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
galactokinase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Otolemur garnettii Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OtoGar3

Genomic

  1. NW_003852413.1 Reference OtoGar3

    Range
    6172174..6177672
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003786124.3 → XP_003786172.1  galactokinase

    UniProtKB/TrEMBL
    H0WJM7
    Related
    ENSOGAP00000001709.2, ENSOGAT00000001918.2
    Conserved Domains (4) summary
    COG0153
    Location:11 → 390
    GalK; Galactokinase [Carbohydrate transport and metabolism]
    pfam00288
    Location:128 → 193
    GHMP_kinases_N; GHMP kinases N terminal domain
    pfam08544
    Location:292 → 373
    GHMP_kinases_C; GHMP kinases C terminal
    pfam10509
    Location:19 → 67
    GalKase_gal_bdg; Galactokinase galactose-binding signature
Nucleotide Protein
Heading Accession and Version

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