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CHST4 carbohydrate sulfotransferase 4 [ Otolemur garnettii (small-eared galago) ]

Gene ID: 100941882, updated on 8-Mar-2024

Summary

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Gene symbol
CHST4
Gene description
carbohydrate sulfotransferase 4
See related
Ensembl:ENSOGAG00000002840
Gene type
protein coding
RefSeq status
MODEL
Organism
Otolemur garnettii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lorisiformes; Galagidae; Otolemur
Orthologs
human mouse all
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Genomic context

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See CHST4 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
102 current OtoGar3 (GCF_000181295.1) Unplaced Scaffold NW_003852442.1 (10499870..10501045)

NW_003852442.1Genomic Context describing neighboring genes Neighboring gene transfer RNA methionine (anticodon CAU) Neighboring gene zinc finger protein 23 Neighboring gene zinc finger protein 19 Neighboring gene tyrosine aminotransferase Neighboring gene endothelial differentiation-related factor 1 pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003852442 Unplaced Scaffold Reference OtoGar3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables N-acetylglucosamine 6-O-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-acetylglucosamine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein sulfation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbohydrate sulfotransferase 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Otolemur garnettii Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OtoGar3

Genomic

  1. NW_003852442.1 Reference OtoGar3

    Range
    10499870..10501045
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003791440.1 → XP_003791488.1  carbohydrate sulfotransferase 4

    UniProtKB/TrEMBL
    H0XYQ4
    Related
    ENSOGAP00000021247.1, ENSOGAT00000002842.2
    Conserved Domains (1) summary
    cl21551
    Location:158 → 360
    Sulfotransfer_1; Sulfotransferase domain
Nucleotide Protein
Heading Accession and Version

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