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CERS3 ceramide synthase 3 [ Otolemur garnettii (small-eared galago) ]

Gene ID: 100941752, updated on 8-Mar-2024

Summary

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Gene symbol
CERS3
Gene description
ceramide synthase 3
See related
Ensembl:ENSOGAG00000008051
Gene type
protein coding
RefSeq status
MODEL
Organism
Otolemur garnettii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lorisiformes; Galagidae; Otolemur
Orthologs
human mouse all
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Genomic context

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See CERS3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
102 current OtoGar3 (GCF_000181295.1) Unplaced Scaffold NW_003852424.1 (1813565..1903812)

NW_003852424.1Genomic Context describing neighboring genes Neighboring gene pyridoxal phosphate phosphatase PHOSPHO2-like Neighboring gene lines homolog 1 Neighboring gene small nucleolar RNA SNORA62/SNORA6 family Neighboring gene ADAM metallopeptidase with thrombospondin type 1 motif 17 Neighboring gene small nucleolar RNA SNORA64/SNORA10 family Neighboring gene 60S ribosomal protein L17 pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003852424 Unplaced Scaffold Reference OtoGar3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sphingosine N-acyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ceramide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ceramide synthase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Otolemur garnettii Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OtoGar3

Genomic

  1. NW_003852424.1 Reference OtoGar3

    Range
    1813565..1903812
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003788634.1 → XP_003788682.1  ceramide synthase 3

    UniProtKB/TrEMBL
    H0WXL2
    Related
    ENSOGAP00000007202.2, ENSOGAT00000008055.2
    Conserved Domains (2) summary
    cd00086
    Location:82 → 125
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
    pfam03798
    Location:131 → 324
    TRAM_LAG1_CLN8; TLC domain
Nucleotide Protein
Heading Accession and Version

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